DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and Klf3

DIOPT Version :10

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001099212.1 Gene:Klf3 / 114845 RGDID:1593290 Length:344 Species:Rattus norvegicus


Alignment Length:381 Identity:99/381 - (25%)
Similarity:144/381 - (37%) Gaps:136/381 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NPSDTEDEA--------PEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVS-------VIMR 106
            :|...:.||        |...:.:.||. :...:..||.||:..   |..|.::       |.:.
  Rat     5 DPVPVKQEAMDPVTVSYPSNYIESMKPN-KYGVIYSTPLPDKFF---QTPEGLAHGIQMEPVDLT 65

  Fly   107 VNSSGAVSSSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEV 171
            ||..|:..|::...:|                                    |||..:|:.:..:
  Rat    66 VNKRGSPPSAAGSPSS------------------------------------LKFPSHRRASPGL 94

  Fly   172 ALPPVQTPETPVAKLVTPPAPA--------------------ECIKEEEIKPILTPIYVSPV--- 213
            ::|    ..:|..|..:||:|.                    ..|:...|.|::.|:.|.||   
  Rat    95 SMP----SSSPPIKKYSPPSPGVQPFGVPLSMPPVMAAALTRHGIRSPGILPVIQPVVVQPVPFM 155

  Fly   214 -ASSASQLILLS---TVAAQQSPTPVP-----------------------KTPTMSEE---KLTT 248
             .|...|.:::|   .:....|..|||                       :|....||   .|..
  Rat   156 YTSHLQQPLMVSLSEEMDNSNSGMPVPVIESYEKPILQKKIKIEPGIEPQRTDYYPEEMSPPLMN 220

  Fly   249 RITAAQA------------------------AATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTG 289
            .::..||                        ...:.||:.|.:..|.|.|.||||||||:|.|||
  Rat   221 SVSPPQALLQENHPSVIVQPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTG 285

  Fly   290 ERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH 345
            |:|:.|.||.|..:|:|||||:||.|.|||.|.|||..|.:.|.|||||:.|.|||
  Rat   286 EKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRH 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 C2H2 Zn finger 265..287 CDD:275368 13/21 (62%)
COG5048 <270..362 CDD:227381 48/76 (63%)
C2H2 Zn finger 295..317 CDD:275368 13/21 (62%)
zf-H2C2_2 309..332 CDD:463886 13/22 (59%)
C2H2 Zn finger 325..345 CDD:275368 10/19 (53%)
Klf3NP_001099212.1 KLF3_N 49..259 CDD:410554 38/249 (15%)
zf-C2H2 259..283 CDD:395048 13/23 (57%)
C2H2 Zn finger 261..283 CDD:275368 13/21 (62%)
C2H2 Zn finger 291..313 CDD:275368 13/21 (62%)
zf-H2C2_2 305..330 CDD:463886 14/24 (58%)
C2H2 Zn finger 321..341 CDD:275368 10/19 (53%)

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