DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and egr3

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:XP_002932749.1 Gene:egr3 / 100488713 XenbaseID:XB-GENE-976448 Length:380 Species:Xenopus tropicalis


Alignment Length:312 Identity:84/312 - (26%)
Similarity:119/312 - (38%) Gaps:85/312 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NGGIITPNPSDTEDEAPEIAVPNKKPRLEQPAMSMTPPPDQKLDDDQKAERVSVIMRVNSSGAVS 114
            |||::..|.:|.|.....:                   |......|...|:|.    ....|...
 Frog   126 NGGLMGQNQNDVESMFHGL-------------------PSYAGCGDLYHEQVG----FQGGGMAP 167

  Fly   115 SSSQDENSSSSTSCCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPV-QT 178
            .:|||.:|:.           .:..|.|.|.:    |:.|::.:           ...:||| |.
 Frog   168 YTSQDYSSAK-----------QSLDSGVFPMI----PDYNLFHH-----------NTEMPPVDQK 206

  Fly   179 P-ETPVAKLVTPP--APAECI---KEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPK 237
            | :...|..|.||  .|.|.|   ||:::.|....:...|.       :.|..:..::.|....|
 Frog   207 PFQNMEAIRVNPPPITPLETIKAFKEKQVLPSFGGMGHQPP-------LTLKPIRPRKYPNRPSK 264

  Fly   238 TPTMSEEKLTTRITAAQAAATRSRIYECSFPDCGKNYFKSSHLKAHQRVHTGERPFICKWENCDK 302
            ||                  ...|.:.|....|.:.:.:|..|..|.|:|||.:||.|:  .|.:
 Frog   265 TP------------------LHERPHACPAEGCDRRFSRSDELTRHLRIHTGHKPFQCR--ICMR 309

  Fly   303 RFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHLSKHVKRH--NKDKANG 352
            .|||||.|:.|.|||||||.|.|..|.:||.|||...:|.|.|  .|||..|
 Frog   310 SFSRSDHLTTHIRTHTGEKPFACDFCGRKFARSDERKRHAKIHLKQKDKKGG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 6/23 (26%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 41/85 (48%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
egr3XP_002932749.1 SFP1 <238..350 CDD:227516 43/138 (31%)
C2H2 Zn finger 274..296 CDD:275368 6/21 (29%)
COG5048 300..>352 CDD:227381 28/53 (53%)
C2H2 Zn finger 304..324 CDD:275368 10/21 (48%)
C2H2 Zn finger 332..352 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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