DRSC/TRiP Functional Genomics Resources

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Protein Alignment cbt and egr1

DIOPT Version :9

Sequence 1:NP_722636.1 Gene:cbt / 33224 FlyBaseID:FBgn0043364 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001090830.1 Gene:egr1 / 100038164 XenbaseID:XB-GENE-853412 Length:499 Species:Xenopus tropicalis


Alignment Length:386 Identity:112/386 - (29%)
Similarity:163/386 - (42%) Gaps:95/386 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EIAVPNKKPRLEQPAM------SMTPPPDQK--LDDDQKAERVSVIM---RVNSSGAVSSSSQDE 120
            |.:..|:..||  |::      |:.|.|:..  |..:.....||.::   ..:.|.|.|||....
 Frog    89 ESSYANQSARL--PSLTYTGRFSLEPAPNSSNTLWPEPLFSLVSGLVGMANASPSSAPSSSPSSS 151

  Fly   121 NSSSSTS---CCSSSSNTNTSTSSVPPTVEDDYPEANVWRNLKFKMNRKRAAEVALPPVQTPE-- 180
            :||||.|   .||..||.::...|..||..:..||                    |.|.|:|:  
 Frog   152 SSSSSQSPPLSCSVQSNDSSPIYSAAPTFPNSSPE--------------------LFPDQSPQPF 196

  Fly   181 --TPVAKLVTPPAPAECIKEEEIKPILTPIYVSPVASSASQLILLSTVAAQQSPTPVPKTPTMSE 243
              ...|.:..|| ||..:.:...:..:.|.|:.|     .|...:|.|:|.|.|....::.|  :
 Frog   197 QNASTASIPYPP-PAYPVSKTTFQVPMIPDYLFP-----QQQGDVSLVSADQKPFQAMESRT--Q 253

  Fly   244 EKLTTRITAAQAAATRS-----------------------------------RIYECSFPDCGKN 273
            :...|.::..:|.||::                                   |.|.|....|.:.
 Frog   254 QPSLTPLSTIKAFATQTSQDLKTINSTYQSQIIKPSRMRKYPNRPSKTPPHERPYACPVESCDRR 318

  Fly   274 YFKSSHLKAHQRVHTGERPFICKWENCDKRFSRSDELSRHKRTHTGEKKFQCSVCQKKFMRSDHL 338
            :.:|..|..|.|:|||::||.|:  .|.:.|||||.|:.|.|||||||.|.|.:|.:||.|||..
 Frog   319 FSRSDELTRHIRIHTGQKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDER 381

  Fly   339 SKHVKRH--NKDKANGVNRHVSLANNNTSASVAASLCDASLHLRAIAPAGSSASSSPISSA 397
            .:|.|.|  .|||.......||:|:..:|.|.:||....|       |..:| .|||:|||
 Frog   382 KRHTKIHLRQKDKKADKATPVSVASPVSSYSPSASTSYPS-------PVPTS-YSSPVSSA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cbtNP_722636.1 zf-C2H2 263..287 CDD:278523 7/23 (30%)
C2H2 Zn finger 265..287 CDD:275368 6/21 (29%)
COG5048 <270..362 CDD:227381 43/93 (46%)
zf-H2C2_2 279..306 CDD:290200 11/26 (42%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 12/22 (55%)
zf-C2H2 323..345 CDD:278523 10/21 (48%)
C2H2 Zn finger 325..345 CDD:275368 9/19 (47%)
egr1NP_001090830.1 DUF3446 106..180 CDD:288757 22/73 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..309 1/20 (5%)
zf-C2H2 308..332 CDD:278523 7/23 (30%)
C2H2 Zn finger 310..332 CDD:275368 6/21 (29%)
zf-H2C2_2 324..349 CDD:290200 11/26 (42%)
C2H2 Zn finger 340..360 CDD:275368 10/21 (48%)
zf-H2C2_2 352..377 CDD:290200 14/24 (58%)
C2H2 Zn finger 368..388 CDD:275368 9/19 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..423 15/50 (30%)
DUF3432 401..486 CDD:288743 16/42 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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