DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED15 and mdt-15

DIOPT Version :10

Sequence 1:NP_608528.1 Gene:MED15 / 33223 FlyBaseID:FBgn0027592 Length:749 Species:Drosophila melanogaster
Sequence 2:NP_001380037.1 Gene:mdt-15 / 175817 WormBaseID:WBGene00007016 Length:780 Species:Caenorhabditis elegans


Alignment Length:911 Identity:202/911 - (22%)
Similarity:293/911 - (32%) Gaps:344/911 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EDWQSQKFRQNVISKIHDLLPPNAQDQTK-----NAGVMENHIFRKSRTKDEYLGLVAKLFMHYK 62
            |||.|.|||::||.::...|..|.|:...     :|..:|.::|.|..:||||:..:||:.....
 Worm     4 EDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEEYVFAKCMSKDEYMRTIAKVINAIN 68

  Fly    63 DMSRKSQQQQQQQQQQGGPPP--------NAEMGGGQN----MMQDPLNALQNLASQGNRNPQM- 114
            ..|:.:......|..|...||        |...||...    :..||    |..::|. |||.: 
 Worm    69 CNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVPPDP----QPTSAQA-RNPPVT 128

  Fly   115 --------MPMGAG--GGAPVPGGPGTASNLLQSLNQQRPGQQQMQPMSNIR--GQMPMGAGGAG 167
                    .|....  ||.|.|....||:  :.:.....|     .|.::||  ||:..|:...|
 Worm   129 VATTQASTTPSAPNPPGGLPAPSASATAA--VAAAVASFP-----SPDTSIRPGGQITPGSQAPG 186

  Fly   168 AQQMMQVQQMQQGGNAPGVMNVMGAGGGQ-NQGQIVGNPGQQMGVGVGMPNQMVGPGPNSGPAVG 231
                        ||..|........|..| |.|..:|.|..|||.    || |.|| ||   ..|
 Worm   187 ------------GGPTPAPNVPFPNGSSQMNGGPAMGQPPPQMGA----PN-MGGP-PN---GYG 230

  Fly   232 GAGGPNAAPGAGGPGPNQMQGGPMNVNAMQQM------PPMQQIQQNQLGMGMNPMMRMGQGNGM 290
            |.|..|..||:|.|    |.|.|.|....:.|      .|...:.|.|...|..|..:       
 Worm   231 GYGMMNGPPGSGAP----MGGNPYNQQIKKDMDQARPWDPSAHMYQQQPQWGAMPPQQ------- 284

  Fly   291 GGPQGMPGQGMQGM---PQGP-----------------HNVVGGPAG------------------ 317
              |.|.||:.|.|.   |.||                 ||.:|.|..                  
 Worm   285 --PHGYPGRPMNGQGATPTGPSSVLESLINQPQQYPGHHNQMGPPGDRNVAAQRAAAQQQQQQQQ 347

  Fly   318 QQQVGGAGLPPNAVQQGGM-------------NPMGGMG-------------------------- 343
            |||....|:.||   ||.|             |..|...                          
 Worm   348 QQQQQRPGMVPN---QGMMSSEDQTVYSAKLRNMRGSCDSLRTRARQCRHEGNHEAAHKLEVMLS 409

  Fly   344 --------------------------VNMPPNLQQKPNMPMGQAGQMFPGNRGGVGVG------G 376
                                      :|:.|..|.:.:  ||....|..|....:|.|      |
 Worm   410 VLEGKRVVSLEYLNHLEMWIARKQDFLNIAPMSQNQNH--MGMNDPMMNGEHAMLGNGQVPNPYG 472

  Fly   377 QQPG---QPFMRSSPSPADAQQLQQQAQLQQMQQQQQQLVVGNQTPTQQPPTPQMPTPNMI---- 434
            ..||   |.:|  .|.|...|..|.....||..||||::               ||..:|:    
 Worm   473 GHPGYGHQQYM--GPPPPHMQMHQPPMWHQQQHQQQQRM---------------MPQDHMMMQGG 520

  Fly   435 --PSPALV-------PQSSPQMMQMQNSQRNIRQQSPSASINT------PGQV-------TGNSP 477
              |...:.       |.:||     .|:.|:....:|:|..|.      ||.:       :|:|.
 Worm   521 GGPVHGMYRGDMGHDPMTSP-----VNNHRHAPYPNPAAMRNNMRMPNGPGPIGRDRNSMSGSSM 580

  Fly   478 FNPQEEALYREKYKQLTKYIEPLKRMLAKISNDGTNVEKMTKMSKLLEI-----LCNPTQRVPLE 537
            ..|...|          ..:.|:.....|:...|:    |..||.|.::     |.|||   |::
 Worm   581 SGPSSGA----------PSMNPMGTPNQKMGTPGS----MGGMSGLDDLNYDDFLPNPT---PID 628

  Fly   538 TLLKCEKALEKMDLISYSGQQFGKSSNPLLEVINTTLQS--PVANHTLYRTFRPTLELLFGTDIT 600
            .|                        .|.|.|...::.:  ||....|..|.|..|::       
 Worm   629 AL------------------------QPTLHVGQNSMNAGPPVQRSNLNETARKELQI------- 662

  Fly   601 APVPAKRPRVEEKSTSFEQEVPHVLQGEIARLDTKFKVKLDTTSQINN-KAIRLICCLDDKRLPS 664
                                           ||.:|::  |...|.:: ..|.::|.:.:::.  
 Worm   663 -------------------------------LDARFEI--DPNHQRHDANHIIVVCKIRNQQF-- 692

  Fly   665 VPPVSVSVPEEYPWQAPDCSLAEQEYSATPFL-QTVQQALIARISKLPKNYSLSHLLDTWEMAVR 728
             ||:.:.||..||  |.:.::.........:| ..:|.::..|:|: |...|::..|:.||..|.
 Worm   693 -PPLRLVVPTTYP--AGNVTVDRAVIDLDAYLYDDLQNSVYERLSR-PGLSSITDYLNAWEEQVN 753

  Fly   729 Q 729
            |
 Worm   754 Q 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED15NP_608528.1 Med15 12..749 CDD:312941 195/902 (22%)
mdt-15NP_001380037.1 Med15 13..780 CDD:312941 195/902 (22%)

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