DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED15 and mdt-15

DIOPT Version :9

Sequence 1:NP_608528.1 Gene:MED15 / 33223 FlyBaseID:FBgn0027592 Length:749 Species:Drosophila melanogaster
Sequence 2:NP_001380037.1 Gene:mdt-15 / 175817 WormBaseID:WBGene00007016 Length:780 Species:Caenorhabditis elegans


Alignment Length:911 Identity:202/911 - (22%)
Similarity:293/911 - (32%) Gaps:344/911 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EDWQSQKFRQNVISKIHDLLPPNAQDQTK-----NAGVMENHIFRKSRTKDEYLGLVAKLFMHYK 62
            |||.|.|||::||.::...|..|.|:...     :|..:|.::|.|..:||||:..:||:.....
 Worm     4 EDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEEYVFAKCMSKDEYMRTIAKVINAIN 68

  Fly    63 DMSRKSQQQQQQQQQQGGPPP--------NAEMGGGQN----MMQDPLNALQNLASQGNRNPQM- 114
            ..|:.:......|..|...||        |...||...    :..||    |..::|. |||.: 
 Worm    69 CNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVPPDP----QPTSAQA-RNPPVT 128

  Fly   115 --------MPMGAG--GGAPVPGGPGTASNLLQSLNQQRPGQQQMQPMSNIR--GQMPMGAGGAG 167
                    .|....  ||.|.|....||:  :.:.....|     .|.::||  ||:..|:...|
 Worm   129 VATTQASTTPSAPNPPGGLPAPSASATAA--VAAAVASFP-----SPDTSIRPGGQITPGSQAPG 186

  Fly   168 AQQMMQVQQMQQGGNAPGVMNVMGAGGGQ-NQGQIVGNPGQQMGVGVGMPNQMVGPGPNSGPAVG 231
                        ||..|........|..| |.|..:|.|..|||.    || |.|| ||   ..|
 Worm   187 ------------GGPTPAPNVPFPNGSSQMNGGPAMGQPPPQMGA----PN-MGGP-PN---GYG 230

  Fly   232 GAGGPNAAPGAGGPGPNQMQGGPMNVNAMQQM------PPMQQIQQNQLGMGMNPMMRMGQGNGM 290
            |.|..|..||:|.|    |.|.|.|....:.|      .|...:.|.|...|..|..:       
 Worm   231 GYGMMNGPPGSGAP----MGGNPYNQQIKKDMDQARPWDPSAHMYQQQPQWGAMPPQQ------- 284

  Fly   291 GGPQGMPGQGMQGM---PQGP-----------------HNVVGGPAG------------------ 317
              |.|.||:.|.|.   |.||                 ||.:|.|..                  
 Worm   285 --PHGYPGRPMNGQGATPTGPSSVLESLINQPQQYPGHHNQMGPPGDRNVAAQRAAAQQQQQQQQ 347

  Fly   318 QQQVGGAGLPPNAVQQGGM-------------NPMGGMG-------------------------- 343
            |||....|:.||   ||.|             |..|...                          
 Worm   348 QQQQQRPGMVPN---QGMMSSEDQTVYSAKLRNMRGSCDSLRTRARQCRHEGNHEAAHKLEVMLS 409

  Fly   344 --------------------------VNMPPNLQQKPNMPMGQAGQMFPGNRGGVGVG------G 376
                                      :|:.|..|.:.:  ||....|..|....:|.|      |
 Worm   410 VLEGKRVVSLEYLNHLEMWIARKQDFLNIAPMSQNQNH--MGMNDPMMNGEHAMLGNGQVPNPYG 472

  Fly   377 QQPG---QPFMRSSPSPADAQQLQQQAQLQQMQQQQQQLVVGNQTPTQQPPTPQMPTPNMI---- 434
            ..||   |.:|  .|.|...|..|.....||..||||::               ||..:|:    
 Worm   473 GHPGYGHQQYM--GPPPPHMQMHQPPMWHQQQHQQQQRM---------------MPQDHMMMQGG 520

  Fly   435 --PSPALV-------PQSSPQMMQMQNSQRNIRQQSPSASINT------PGQV-------TGNSP 477
              |...:.       |.:||     .|:.|:....:|:|..|.      ||.:       :|:|.
 Worm   521 GGPVHGMYRGDMGHDPMTSP-----VNNHRHAPYPNPAAMRNNMRMPNGPGPIGRDRNSMSGSSM 580

  Fly   478 FNPQEEALYREKYKQLTKYIEPLKRMLAKISNDGTNVEKMTKMSKLLEI-----LCNPTQRVPLE 537
            ..|...|          ..:.|:.....|:...|:    |..||.|.::     |.|||   |::
 Worm   581 SGPSSGA----------PSMNPMGTPNQKMGTPGS----MGGMSGLDDLNYDDFLPNPT---PID 628

  Fly   538 TLLKCEKALEKMDLISYSGQQFGKSSNPLLEVINTTLQS--PVANHTLYRTFRPTLELLFGTDIT 600
            .|                        .|.|.|...::.:  ||....|..|.|..|::       
 Worm   629 AL------------------------QPTLHVGQNSMNAGPPVQRSNLNETARKELQI------- 662

  Fly   601 APVPAKRPRVEEKSTSFEQEVPHVLQGEIARLDTKFKVKLDTTSQINN-KAIRLICCLDDKRLPS 664
                                           ||.:|::  |...|.:: ..|.::|.:.:::.  
 Worm   663 -------------------------------LDARFEI--DPNHQRHDANHIIVVCKIRNQQF-- 692

  Fly   665 VPPVSVSVPEEYPWQAPDCSLAEQEYSATPFL-QTVQQALIARISKLPKNYSLSHLLDTWEMAVR 728
             ||:.:.||..||  |.:.::.........:| ..:|.::..|:|: |...|::..|:.||..|.
 Worm   693 -PPLRLVVPTTYP--AGNVTVDRAVIDLDAYLYDDLQNSVYERLSR-PGLSSITDYLNAWEEQVN 753

  Fly   729 Q 729
            |
 Worm   754 Q 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED15NP_608528.1 Med15 12..749 CDD:255446 195/902 (22%)
mdt-15NP_001380037.1 Med15 13..780 CDD:312941 195/902 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007378
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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