DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and CAJ1

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_010967.3 Gene:CAJ1 / 856772 SGDID:S000000850 Length:391 Species:Saccharomyces cerevisiae


Alignment Length:283 Identity:76/283 - (26%)
Similarity:118/283 - (41%) Gaps:73/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNP 80
            :|:|:    ::|.||.:|..|...|:||||||.|.|.||||:.|||||..|||.:|.||:|||:|
Yeast     1 MVKET----EYYDILGIKPEATPTEIKKAYRRKAMETHPDKHPDDPDAQAKFQAVGEAYQVLSDP 61

  Fly    81 DKRKTYDRCG-EECLKKEGMMD--------HGGDPFSSFFGDFGFH---------FGGDGQQQDA 127
            ..|..||:.| |:.:.::|..|        .|||.|..:.|:|...         ||.:.::..|
Yeast    62 GLRSKYDQFGKEDAVPQQGFEDASEYFTAIFGGDGFKDWIGEFSLFKELNEATEMFGKEDEEGTA 126

  Fly   128 PRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVC 192
            ....:       ..:|...|..|:...||     |...:|                         
Yeast   127 ATETE-------KADESTDGGMVKHDTNK-----AESLKK------------------------- 154

  Fly   193 DECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDL 257
                 .||..|:|...:|:|:...:.. .:.|.|....::.:....::.|:......|.||.|. 
Yeast   155 -----DKLSKEQREKLMEMEKKRREDM-MKQVDELAEKLNEKISRYLIAVKSNNLEEFTRKLDQ- 212

  Fly   258 YTNVTISLQD-ALVGFSMEIKHL 279
                  .::| .|..|.:|:.:|
Yeast   213 ------EIEDLKLESFGLELLYL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 74/274 (27%)
CAJ1NP_010967.3 PRK10767 7..>96 CDD:236757 42/88 (48%)
DnaJ-X 176..376 CDD:433858 12/62 (19%)

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