DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and SCJ1

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_013941.2 Gene:SCJ1 / 855254 SGDID:S000004827 Length:377 Species:Saccharomyces cerevisiae


Alignment Length:376 Identity:115/376 - (30%)
Similarity:176/376 - (46%) Gaps:68/376 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQD 69
            |..:.:.|||||:....| :|:|.||.:.|:|...|:|.|||:|:|:.|||||....:|..||.:
Yeast     4 KLYIHLILSLLLLPLILA-QDYYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIE 67

  Fly    70 LGAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGG------------DPFS----SFFGDFGFHF 118
            :|.||:|||:|:|:|.||:.|.:.:|..|    ||            |||.    .|.|..|...
Yeast    68 VGEAYDVLSDPEKKKIYDQFGADAVKNGG----GGGGPGGPGAGGFHDPFDIFERMFQGGHGGPG 128

  Fly   119 GGDGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPA---SGT-----RKC-NCR--- 171
            ||.||:| ..||..|.:...:||::.|||:.:|...|......|   ||:     .:| :|:   
Yeast   129 GGFGQRQ-RQRGPMIKVQEKLSLKQFYSGSSIEFTLNLNDECDACHGSGSADGKLAQCPDCQGRG 192

  Fly   172 ---------------QEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQET 221
                           |:|..|..|.|:   |.:..|..|...|:..:.:...::|..|.......
Yeast   193 VIIQVLRMGIMTQQIQQMCGRCGGTGQ---IIKNECKTCHGKKVTKKNKFFHVDVPPGAPRNYMD 254

  Fly   222 RFVAEGEPHIDGEPGDLIVRVQQ--MPHPRFLRKNDDLYTNVTISLQDALV-GFSMEIKHLDGHL 283
            ..|.|.|...|.:.|||::..::  ..:..:.|:.|:||....:|..:||. |:...|:.||.: 
Yeast   255 TRVGEAEKGPDFDAGDLVIEFKEKDTENMGYRRRGDNLYRTEVLSAAEALYGGWQRTIEFLDEN- 318

  Fly   284 VPVTREKVTWPGARIRKKGE-------GMPNFENNNLTGNLYITFDVEFPK 327
            .||   |::.|...:...||       |||  :.:...|:|||.:.|..||
Yeast   319 KPV---KLSRPAHVVVSNGEVEVVKGFGMP--KGSKGYGDLYIDYVVVMPK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 109/359 (30%)
DnaJ 25..87 CDD:278647 30/61 (49%)
DnaJ_C 131..328 CDD:199909 58/234 (25%)
DnaJ_zf 160..>195 CDD:304418 12/61 (20%)
SCJ1NP_013941.2 DnaJ 21..377 CDD:223560 109/359 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53793
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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