DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shv and SCJ1

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_013941.2 Gene:SCJ1 / 855254 SGDID:S000004827 Length:377 Species:Saccharomyces cerevisiae


Alignment Length:376 Identity:115/376 - (30%)
Similarity:176/376 - (46%) Gaps:68/376 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQD 69
            |..:.:.|||||:....| :|:|.||.:.|:|...|:|.|||:|:|:.|||||....:|..||.:
Yeast     4 KLYIHLILSLLLLPLILA-QDYYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIE 67

  Fly    70 LGAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGG------------DPFS----SFFGDFGFHF 118
            :|.||:|||:|:|:|.||:.|.:.:|..|    ||            |||.    .|.|..|...
Yeast    68 VGEAYDVLSDPEKKKIYDQFGADAVKNGG----GGGGPGGPGAGGFHDPFDIFERMFQGGHGGPG 128

  Fly   119 GGDGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPA---SGT-----RKC-NCR--- 171
            ||.||:| ..||..|.:...:||::.|||:.:|...|......|   ||:     .:| :|:   
Yeast   129 GGFGQRQ-RQRGPMIKVQEKLSLKQFYSGSSIEFTLNLNDECDACHGSGSADGKLAQCPDCQGRG 192

  Fly   172 ---------------QEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQET 221
                           |:|..|..|.|:   |.:..|..|...|:..:.:...::|..|.......
Yeast   193 VIIQVLRMGIMTQQIQQMCGRCGGTGQ---IIKNECKTCHGKKVTKKNKFFHVDVPPGAPRNYMD 254

  Fly   222 RFVAEGEPHIDGEPGDLIVRVQQ--MPHPRFLRKNDDLYTNVTISLQDALV-GFSMEIKHLDGHL 283
            ..|.|.|...|.:.|||::..::  ..:..:.|:.|:||....:|..:||. |:...|:.||.: 
Yeast   255 TRVGEAEKGPDFDAGDLVIEFKEKDTENMGYRRRGDNLYRTEVLSAAEALYGGWQRTIEFLDEN- 318

  Fly   284 VPVTREKVTWPGARIRKKGE-------GMPNFENNNLTGNLYITFDVEFPK 327
            .||   |::.|...:...||       |||  :.:...|:|||.:.|..||
Yeast   319 KPV---KLSRPAHVVVSNGEVEVVKGFGMP--KGSKGYGDLYIDYVVVMPK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 108/356 (30%)
SCJ1NP_013941.2 DnaJ_bact 23..370 CDD:274090 108/356 (30%)

Return to query results.
Submit another query.