DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnaja3

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_076135.3 Gene:Dnaja3 / 83945 MGIID:1933786 Length:480 Species:Mus musculus


Alignment Length:380 Identity:111/380 - (29%)
Similarity:170/380 - (44%) Gaps:71/380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRK 84
            |.|..|:|:||.|.:||:..::||||.:|||:.|||.|||||.|..||..|..||||||:..|||
Mouse    88 SLAKDDYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 152

  Fly    85 TYDRCGE------ECLKKEGMMDHGG---DP---FSSFFGDFGFHFGGDGQQQ-DAPRGADIVMD 136
            .||..|.      .....:|.. .||   ||   |...||:|.....||.|.. |.|:  :.:|:
Mouse   153 QYDAYGSAGFDPGTSSSGQGYW-RGGPSVDPEELFRKIFGEFSSSPFGDFQNVFDQPQ--EYIME 214

  Fly   137 LYVS-----LEELYSGNFVEIVR------NKPVTKPASGTRKCNCR----QEMVTRNLGP----- 181
            |..:     :.:.::.|.::...      |:|      ||:..:|.    ..|.|.|.||     
Mouse   215 LTFNQAAKGVNKEFTVNIMDTCERCDGKGNEP------GTKVQHCHYCGGSGMETINTGPFVMRS 273

  Fly   182 ------GRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRF-VAEGEPHIDGEPGDLI 239
                  ||..:|... |..|.......:::.:.|.|..|:.|||..|. |.:.|..:       .
Mouse   274 TCRRCGGRGSIITNP-CVVCRGAGQAKQKKRVTIPVPAGVEDGQTVRMPVGKREIFV-------T 330

  Fly   240 VRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGA-----RIR 299
            .|||:  .|.|.|...|:::::.||:..|::|.:.:.:.|...:      .||.|..     :||
Mouse   331 FRVQK--SPVFRRDGADIHSDLFISIAQAILGGTAKAQGLYETI------NVTIPAGIQTDQKIR 387

  Fly   300 KKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKILDQSSINRIYNGL 354
            ..|:|:|.. |:...|:.||...:..||:..:.:....|....|::.:....||:
Mouse   388 LTGKGIPRI-NSYGYGDHYIHIKIRVPKRLSSRQQNLILSYAEDETDVEGTVNGV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 108/368 (29%)
DnaJ 25..87 CDD:278647 35/61 (57%)
DnaJ_C 131..328 CDD:199909 52/228 (23%)
DnaJ_zf 160..>195 CDD:304418 12/49 (24%)
Dnaja3NP_076135.3 DnaJ 90..480 CDD:223560 110/378 (29%)
DnaJ 93..155 CDD:278647 35/61 (57%)
DnaJ_C 207..416 CDD:199909 54/233 (23%)
DnaJ_zf 236..296 CDD:199908 15/66 (23%)
CXXCXGXG motif 236..243 0/6 (0%)
CXXCXGXG motif 253..260 1/6 (17%)
CXXCXGXG motif 275..282 1/6 (17%)
CXXCXGXG motif 289..296 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 437..468 2/5 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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