DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and J3

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_189997.1 Gene:J3 / 823531 AraportID:AT3G44110 Length:420 Species:Arabidopsis thaliana


Alignment Length:356 Identity:135/356 - (37%)
Similarity:199/356 - (55%) Gaps:43/356 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYDRCG 90
            ||:||.|.|:|:..::||||::.|.:.||||. .||:   ||::|..||||||:|:||:.||:.|
plant    15 FYEILGVPKSASPEDLKKAYKKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYG 75

  Fly    91 EECLKKEGMMDHGG--DP---FSSFFGDFGFHFGGD-GQQQDAPRGADIVMDLYVSLEELYSGNF 149
            |:.| ||||...||  ||   ||||||  |..|||: .:|:...||.|:|..|.||||::|.|..
plant    76 EDAL-KEGMGGGGGGHDPFDIFSSFFG--GGPFGGNTSRQRRQRRGEDVVHPLKVSLEDVYLGTM 137

  Fly   150 --VEIVRNKPVTK------PASGTRKC-NCR---QEMVTRNLGPGRFQMIQ----------QTV- 191
              :.:.||...:|      .:..:.|| .|:   .::..|.||||..|.:|          :|: 
plant   138 KKLSLSRNALCSKCNGKGSKSGASLKCGGCQGSGMKVSIRQLGPGMIQQMQHACNECKGTGETIN 202

  Fly   192 ----CDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLR 252
                |.:|...|::.|::.||:.||:||...|:..|..:.:...|...||::..:||..||:|.|
plant   203 DRDRCPQCKGDKVIPEKKVLEVNVEKGMQHSQKITFEGQADEAPDTVTGDIVFVLQQKEHPKFKR 267

  Fly   253 KNDDLYTNVTISLQDALVGFSMEIKHLDGH--LVPVTREKVTWPGARIRKKGEGMPNFENNNLTG 315
            |.:||:...|:||.:||.||...:.||||.  |:.....:|..|.:......||||.::...:.|
plant   268 KGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKG 332

  Fly   316 NLYITFDVEFPKKDLTEEDKEALKKILDQSS 346
            .|||.|.|||| ..|:.:..:||:.:|.:.|
plant   333 KLYIHFTVEFP-DSLSPDQTKALEAVLPKPS 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 134/353 (38%)
J3NP_189997.1 PTZ00037 7..420 CDD:240236 135/356 (38%)

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