DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and AT2G20560

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_179646.1 Gene:AT2G20560 / 816578 AraportID:AT2G20560 Length:337 Species:Arabidopsis thaliana


Alignment Length:375 Identity:117/375 - (31%)
Similarity:165/375 - (44%) Gaps:95/375 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDD-PDASTKFQDLGAAYEVLSNPDKRKTY 86
            |.|:||:|.|.::|:.:::|||||:||.:.|||||.:: .||...|:.:..||||||:|.|:..|
plant     2 GVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAMFKQISEAYEVLSDPQKKAVY 66

  Fly    87 DRCGEECLKKEGMM---DHGG-------------------------------DPF---------- 107
            |:.|||.||  |.:   |.||                               .||          
plant    67 DQYGEEGLK--GNVPPPDAGGATYFSTGDGPTSFRFNPRNADDIFAEFFGFSSPFGGGRGGTRFS 129

  Fly   108 SSFFGD-----FGFHFGGDG---QQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASG 164
            ||.|||     ||...||.|   ....|.:.|.|...|..|||:||.|.                
plant   130 SSMFGDNMFASFGEGGGGGGGSMHHGGARKAAPIENKLPCSLEDLYKGT---------------- 178

  Fly   165 TRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEP 229
            |:|....:|:..                   .:.|.:..|..|.|:|:.|...|.:..|..:|..
plant   179 TKKMRISREIAD-------------------VSGKTMQVEEILTIDVKPGWKKGTKITFPEKGNE 224

  Fly   230 HIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDGH--LVPVTREKVT 292
            .....|.||:..:.:.|||.|.|:.:||.....|||.:||.|:::.:..|||.  .:|||  .|.
plant   225 QPGVIPADLVFIIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIPVT--NVV 287

  Fly   293 WPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKIL 342
            .|........||||..::....|||.|.|:::||.: ||.|.|..:||:|
plant   288 HPEYEEVVPKEGMPLQKDQTKRGNLRIKFNIKFPTR-LTSEQKTGVKKLL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 116/373 (31%)
AT2G20560NP_179646.1 DnaJ_bact 4..336 CDD:274090 115/371 (31%)

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