DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and AT2G20550

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_179645.1 Gene:AT2G20550 / 816577 AraportID:AT2G20550 Length:284 Species:Arabidopsis thaliana


Alignment Length:323 Identity:79/323 - (24%)
Similarity:124/323 - (38%) Gaps:62/323 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NTNEVKKAYRRLAKELHPD--KNKDD----------PDASTKFQDLGAAYEVLSNPDKRKTYDRC 89
            |.:::...:..:::...|.  :|.||          |.......|:.:.:..:|||...:..|..
plant     6 NADDIFSEFFGVSRPSGPSGPRNADDIYSEFFGVSSPSGPRNKDDIFSEFFEVSNPSGPRDKDDI 70

  Fly    90 GEECLKKEGMMDHGGDPFSSFFGDFGFHFGGDG-----QQQDAPRGADIVMDLYVSLEELYSGNF 149
            ..|         :.|.|..|..|..|...||.|     ....|.:.|.:...|..|||:||.|. 
plant    71 SAE---------YFGVPSPSGSGSSGGREGGGGGGGTMHHGGARKAAPVEKKLPCSLEDLYKGT- 125

  Fly   150 VEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQG 214
                           |:|....:|:.      |.|.             |....:..|.::|:.|
plant   126 ---------------TKKMKISREIA------GVFG-------------KTTQVQEILTVDVKPG 156

  Fly   215 MVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHL 279
            ...|.:..|..:|.......|.||:..:.:.|||.|.|:.:||.....||:.:|..|:::.:..|
plant   157 WKTGTKITFSEKGNEQPGVIPADLVFIIDEKPHPVFTREGNDLVVTQKISVLEAFTGYTVNLTTL 221

  Fly   280 DGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKIL 342
            ||..:.:....|..|........||||..::....|||.|.|:::|| ..||.|.|..|||:|
plant   222 DGRRLTIPVNTVIHPEYVEVVPNEGMPLQKDQAKKGNLRIKFNIKFP-TTLTSEQKTGLKKLL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 79/323 (24%)
AT2G20550NP_179645.1 DnaJ_C 108..271 CDD:199909 50/198 (25%)

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