DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb13

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_705755.2 Gene:Dnajb13 / 69387 MGIID:1916637 Length:316 Species:Mus musculus


Alignment Length:353 Identity:114/353 - (32%)
Similarity:169/353 - (47%) Gaps:73/353 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYD 87
            |.|:|.:|.|.:|:...::|||||:||.:.||.|: .:|.|...|:.:..||:|||:|.||..||
Mouse     2 GLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKS-SEPGAPEIFKQIAEAYDVLSDPVKRGIYD 65

  Fly    88 RCGEECLK-------------KEGMMDH-----------GGD-PFSSFF----GDFGFHFGG--- 120
            :.|||.||             ..|.:.|           ||| |||.||    .|...:|||   
Mouse    66 KFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFFDAEGNDIDLNFGGLWG 130

  Fly   121 -DGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRF 184
             ..|:||.|    |..|||:|||:|:.|                    |..:.::..|.|...|:
Mouse   131 RGVQKQDPP----IERDLYLSLEDLFFG--------------------CTKKIKISRRVLNEDRY 171

  Fly   185 QMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPR 249
               ..|:           :::.|.|:|..|...|....|..||:...:..|.|:|..|::..|||
Mouse   172 ---SSTI-----------KDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPR 222

  Fly   250 FLRKNDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLT 314
            |.|::|:|:....|.|..||...::|:|.||..|:.:....:..|.......|||||..||.:..
Mouse   223 FRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKK 287

  Fly   315 GNLYITFDVEFPKKDLTEEDKEALKKIL 342
            |:|:|.||::||.: ||.:.|:.|::.|
Mouse   288 GDLFIFFDIQFPTR-LTPQKKQMLRQAL 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 113/351 (32%)
Dnajb13NP_705755.2 DnaJ_bact 4..312 CDD:274090 112/347 (32%)

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