DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb11

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001177733.1 Gene:Dnajb11 / 67838 MGIID:1915088 Length:358 Species:Mus musculus


Alignment Length:351 Identity:220/351 - (62%)
Similarity:274/351 - (78%) Gaps:7/351 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDL 70
            ||::    |.|:....|||||||||.|.::|:..::|||||:||.:||||:|.|||.|..|||||
Mouse    10 CLLL----LYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDL 70

  Fly    71 GAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGGDPFSSFFGDFGFHFGGDGQQQD--APRGADI 133
            ||||||||:.:|||.||..|||.| |:|.....||.||.|||||||.|||..:|||  .|||:||
Mouse    71 GAAYEVLSDSEKRKQYDTYGEEGL-KDGHQSSHGDIFSHFFGDFGFMFGGTPRQQDRNIPRGSDI 134

  Fly   134 VMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNV 198
            ::||.|:|||:|:|||||:||||||.:.|.|.|||||||||.|..||||||||.|:.||||||||
Mouse   135 IVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNV 199

  Fly   199 KLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTI 263
            ||||||||||:|:|.|:.||.|..|:.|||||:|||||||..|::.:.|..|.|:.||||||||:
Mouse   200 KLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTV 264

  Fly   264 SLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKK 328
            ||.:|||||.|:|.|||||.|.::|:|:|.|||::.|||||:|||:|||:.|:|.|||||:|||:
Mouse   265 SLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKE 329

  Fly   329 DLTEEDKEALKKILDQSSINRIYNGL 354
            .||||.||.:|::|.|..:.::||||
Mouse   330 QLTEEAKEGIKQLLKQGPVQKVYNGL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 212/325 (65%)
DnaJ 25..87 CDD:278647 40/61 (66%)
DnaJ_C 131..328 CDD:199909 131/196 (67%)
DnaJ_zf 160..>195 CDD:304418 24/34 (71%)
Dnajb11NP_001177733.1 DnaJ 22..344 CDD:223560 210/322 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850587
Domainoid 1 1.000 283 1.000 Domainoid score I1639
eggNOG 1 0.900 - - E2759_KOG0713
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9464
Inparanoid 1 1.050 454 1.000 Inparanoid score I1583
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53793
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007426
OrthoInspector 1 1.000 - - oto94101
orthoMCL 1 0.900 - - OOG6_105068
Panther 1 1.100 - - LDO PTHR44298
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2491
SonicParanoid 1 1.000 - - X5560
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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