DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajc5b

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001157008.1 Gene:Dnajc5b / 66326 MGIID:1913576 Length:199 Species:Mus musculus


Alignment Length:71 Identity:32/71 - (45%)
Similarity:47/71 - (66%) Gaps:0/71 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRK 84
            |.:|...|:||.:.|.|:..|:||.||:||...|||||.|||.|:.||:::..|:.:|::..||.
Mouse    14 STSGESLYEILGLHKGASCEEIKKTYRKLALRHHPDKNPDDPSAAEKFKEINNAHTILTDTSKRN 78

  Fly    85 TYDRCG 90
            .||:.|
Mouse    79 IYDKYG 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 31/69 (45%)
DnaJ 25..87 CDD:278647 27/61 (44%)
DnaJ_C 131..328 CDD:199909
DnaJ_zf 160..>195 CDD:304418
Dnajc5bNP_001157008.1 DnaJ 19..>88 CDD:223560 30/66 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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