DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and zgc:122979

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001032663.2 Gene:zgc:122979 / 641576 ZFINID:ZDB-GENE-051127-45 Length:360 Species:Danio rerio


Alignment Length:351 Identity:105/351 - (29%)
Similarity:153/351 - (43%) Gaps:73/351 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYDRC 89
            |:|.:|.|..::|..|::|||:|||...||||| .|.||..||:.:..||:||::|:||..||:.
Zfish    51 DYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKN-SDADAEDKFKQIAQAYDVLTDPEKRNIYDQQ 114

  Fly    90 GEECLKKEGM---------------------------MDHGGDPFSSF----FGDFGFHFGGDGQ 123
            |   |.|.|:                           :|...|.|:.|    ......|.|..|.
Zfish   115 G---LTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGG 176

  Fly   124 QQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQ 188
            .:  |.|...|.||.||||::..|          |||....||                    ::
Zfish   177 LK--PAGDAEVHDLSVSLEDILMG----------VTKRVKLTR--------------------LR 209

  Fly   189 QTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRK 253
            ||     ....|..|||..::||::|..:|....|..||...:...|.||...:::..|..|.|.
Zfish   210 QT-----DKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRD 269

  Fly   254 NDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLY 318
            ...:....||:|::||.|.::.:..|||.:.|:....|..|.:..|..|||:|..:|....|:|.
Zfish   270 GSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLL 334

  Fly   319 ITFDVEFPKKDLTEEDKEALKKILDQ 344
            :.|.|.||.: :....||.:|..|.|
Zfish   335 VEFQVVFPDR-IPPSSKEIIKHSLGQ 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 105/351 (30%)
DnaJ 25..87 CDD:278647 29/61 (48%)
DnaJ_C 131..328 CDD:199909 56/196 (29%)
DnaJ_zf 160..>195 CDD:304418 5/34 (15%)
zgc:122979NP_001032663.2 DnaJ 50..355 CDD:223560 102/345 (30%)
DnaJ 51..112 CDD:278647 29/61 (48%)
DnaJ_C 185..345 CDD:199909 56/195 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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