DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb8

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_064348.1 Gene:Dnajb8 / 56691 MGIID:1922801 Length:227 Species:Mus musculus


Alignment Length:237 Identity:67/237 - (28%)
Similarity:99/237 - (41%) Gaps:53/237 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDD-PDASTKFQDLGAAYEVLSNPDKRKTYDR 88
            ::|::|.|:.:|:..::|||||:||...|||||.|: .:|..||:.:..||||||:..||..|||
Mouse     3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDR 67

  Fly    89 CGEECLKKEG--MMDHGG------------DPFSSFFG---DFGFH-----FGGDGQQQDAPRGA 131
            .|.:..:..|  .:.|..            |.|..|||   .|.|.     |.|.|:    |.|.
Mouse    68 AGCDRWRAGGGANVPHSSPFGAGYPFRNPEDIFREFFGGLDPFSFEFWDTPFSGRGR----PHGL 128

  Fly   132 DIVMDLYVSLEELYSG-----NFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTV 191
            ..|..         ||     .|:|.:.:........|:|........  ...|...|:.:..:.
Mouse   129 HRVFP---------SGFGEFPAFMEALSSFNTLGHGGGSRSTFSSASF--GGSGSSGFKSVMSST 182

  Fly   192 CDECPNVKLVNEERTLE-----IEVEQGMVDGQETRFVAEGE 228
              |..|.:.|..:|.:|     :|||:   |||.......|:
Mouse   183 --EMVNGRKVTTKRIIENGQERVEVEE---DGQLRSVTVNGK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 67/237 (28%)
DnaJ 25..87 CDD:278647 28/62 (45%)
DnaJ_C 131..328 CDD:199909 21/108 (19%)
DnaJ_zf 160..>195 CDD:304418 4/34 (12%)
Dnajb8NP_064348.1 DnaJ 3..66 CDD:278647 28/62 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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