DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shv and dnajc10

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001077016.1 Gene:dnajc10 / 557858 ZFINID:ZDB-GENE-070327-1 Length:791 Species:Danio rerio


Alignment Length:147 Identity:48/147 - (32%)
Similarity:81/147 - (55%) Gaps:9/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQD 69
            |.|:...:::.|.....:..|:||:|.:.:.|:|.::::|:::||..:|||||.:|..|..||..
Zfish    13 KSLLFAFIAVWLFVSISSDEDYYKLLGISREASTRDIRQAFKKLALTMHPDKNPNDETAHDKFLK 77

  Fly    70 LGAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGG--DPFSSFFGDFGFHFGGDGQQQDAPRGAD 132
            :..|||||.:.|.||.||:.||:.|:.|   ..||  :.::.:..|||. :..|.:.....||. 
Zfish    78 INRAYEVLKDEDLRKKYDKYGEKGLQDE---QQGGRYESWNYYRYDFGI-YDDDPEITTLDRGD- 137

  Fly   133 IVMDLYVSLEELYSGNF 149
              .|..|:..|::..||
Zfish   138 --FDAAVNSGEVWFVNF 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 45/127 (35%)
dnajc10NP_001077016.1 DnaJ 33..>120 CDD:440252 34/89 (38%)
PDI_a_ERdj5_N 128..228 CDD:239301 7/28 (25%)
Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold <276..318 CDD:469754
PDI_a_family 348..443 CDD:239259
PDI_a_ERdj5_C 450..546 CDD:239302
PDI_a_ERdj5_C 552..660 CDD:239302
PDI_a_ERdj5_C 666..772 CDD:239302
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.