DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb14

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001102663.2 Gene:Dnajb14 / 499716 RGDID:1591949 Length:377 Species:Rattus norvegicus


Alignment Length:202 Identity:68/202 - (33%)
Similarity:92/202 - (45%) Gaps:60/202 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYDR 88
            :::|::|.|.|:|...::|||||:||.:.||||| ..|.|:..|:.:|.||.|||||:|||.||.
  Rat   107 KNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKN-HAPGATDAFKKIGNAYAVLSNPEKRKQYDL 170

  Fly    89 CGEE---CL-KKEGMMD-HGG--------DPFSSFFGDFGFHFGG-------------------D 121
            .|.|   |. :..|..: |.|        |.|:.|||. ||..|.                   .
  Rat   171 TGSEEEACSPQSNGRFNFHRGCEADITPEDLFNIFFGG-GFPSGSVHSFSNGRAAYSHQHQHRHS 234

  Fly   122 GQQQDAPRGAD-----------IVMDLYVSLEELYSGNFVEIVRNKPVT-KPASG-TRKCNCRQE 173
            |.:::..||..           ||:.|...|.:|       :|.|.|.: .|.|| |.|      
  Rat   235 GHEREEERGDGGFSVFIQLMPVIVLILVSLLSQL-------MVSNPPYSLYPRSGQTIK------ 286

  Fly   174 MVTRNLG 180
            |.|.|||
  Rat   287 MQTENLG 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 68/201 (34%)
Dnajb14NP_001102663.2 DnaJ_bact 109..>214 CDD:274090 46/106 (43%)
DUF1977 271..367 CDD:462754 12/29 (41%)

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