DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnaja1

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001011012.1 Gene:dnaja1 / 496421 XenbaseID:XB-GENE-976936 Length:400 Species:Xenopus tropicalis


Alignment Length:357 Identity:131/357 - (36%)
Similarity:181/357 - (50%) Gaps:56/357 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYDRCG 90
            :|.||.||.|:..:|:|||||:||.:.|||||   |:...||:.:..||||||:..||..||:.|
 Frog     7 YYDILGVKPNSTPDELKKAYRKLALKYHPDKN---PNEGEKFKQISQAYEVLSDSKKRDLYDKGG 68

  Fly    91 EECLKKEGMMDHGGDPFSSFFGDFGFHFGGDGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRN 155
            |:.:|:.||   ||..|:|....|...|||.|:.|...||.::|..|.||||:||:|    ..|.
 Frog    69 EQAIKEGGM---GGGGFASPMDIFDMFFGGGGRMQRERRGKNVVHQLSVSLEDLYNG----ATRK 126

  Fly   156 KPVTKPA-----------SGTRKC--NCR---QEMVTRNLGPGRFQMIQQTVCDECPNV------ 198
            ..|.|..           .|..:|  |||   .::....||||..|.| |:||.||...      
 Frog   127 LAVQKNTICDKCEGRGGKKGAVECCPNCRGTGMQIRIHQLGPGMVQQI-QSVCPECQGQGERINP 190

  Fly   199 ----------KLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRK 253
                      |:|.|::.||:.:::||.|||:..|..||:.....|.||:|:.:.|..|..|.|:
 Frog   191 KDRCKSCNGRKIVREKKILEVHIDKGMKDGQKITFSGEGDQEPGLEAGDIIIVLDQKDHSVFTRR 255

  Fly   254 NDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKG-------EGMPNFENN 311
            |:||..::.|.|.:||.||...|..||...:.:|    :.|| :|.|.|       ||||.:...
 Frog   256 NEDLIIHMEIELVEALCGFQKPIVTLDSRTIIIT----SHPG-QIVKHGDVKCVLNEGMPIYRRP 315

  Fly   312 NLTGNLYITFDVEFPKKDLTEEDK-EALKKIL 342
            ...|.|.:.|.|.||..:....|| ..|:|:|
 Frog   316 YDKGRLIVQFQVNFPASNSISPDKLPLLEKLL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 131/357 (37%)
DnaJ 25..87 CDD:278647 30/60 (50%)
DnaJ_C 131..328 CDD:199909 77/235 (33%)
DnaJ_zf 160..>195 CDD:304418 15/50 (30%)
dnaja1NP_001011012.1 PTZ00037 7..397 CDD:240236 131/357 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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