DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnaja2a

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_998658.1 Gene:dnaja2a / 406814 ZFINID:ZDB-GENE-040426-2884 Length:412 Species:Danio rerio


Alignment Length:357 Identity:136/357 - (38%)
Similarity:194/357 - (54%) Gaps:42/357 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTY 86
            |....|.||.|..:|:.||:|||||:||||.|||||   |:|..||:::..|||||:||:||..|
Zfish     5 ADTKLYDILGVSPSASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLTNPEKRDMY 66

  Fly    87 DRCGEECLKKEGMMDHGG--DPFSSFFGD--FGFHFGGDGQQQDA--PRGADIVMDLYVSLEELY 145
            ||.||:.| :||....||  |.||..||.  ||| .||.|:.::.  .||.|:|..|.||||:||
Zfish    67 DRYGEQGL-REGGCGGGGMDDIFSHIFGGGLFGF-MGGQGRSRNGGRRRGEDMVHPLKVSLEDLY 129

  Fly   146 SGNFVEIVRNKPVT--------KPASGTRKCN-CR---QEMVTRNLGPGRFQMIQQTV------- 191
            :|...::..:|.|.        ..:...:||. ||   ..::.|.||||..|.:|...       
Zfish   130 NGKTTKLQLSKNVLCSTCNGQGGKSGAVQKCTACRGRGMRIMIRQLGPGMVQQMQSVCTDCNGEG 194

  Fly   192 --------CDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHP 248
                    |.:|...|::.|.:.||:.|::||..||:..|..|.:.....||||:::.:|:..|.
Zfish   195 EVISEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQKITFGGEADQSPGVEPGDIVLVLQEKEHE 259

  Fly   249 RFLRKNDDLYTNVTISLQDALVGFSMEIKHLDGH--LVPVTREKVTWPGARIRKKGEGMPNFENN 311
            .:.|:.:||:....|.|.:||.||...:|||||.  :|.....|:..||:....:|||||.:.|.
Zfish   260 TYRREGNDLHMTHKIGLVEALCGFHFTLKHLDGRQIVVKYPAGKIIEPGSVRVVRGEGMPQYRNP 324

  Fly   312 NLTGNLYITFDVEFPKKDLTEEDKEALKKILD 343
            ...|:|:|.|||:||..:....:|  ||::.|
Zfish   325 FEKGDLFIKFDVQFPDNNWLSPEK--LKELED 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 135/354 (38%)
dnaja2aNP_998658.1 PTZ00037 4..412 CDD:240236 136/357 (38%)

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