DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnajb6

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_012819877.1 Gene:dnajb6 / 394712 XenbaseID:XB-GENE-972413 Length:336 Species:Xenopus tropicalis


Alignment Length:291 Identity:78/291 - (26%)
Similarity:119/291 - (40%) Gaps:69/291 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPD-ASTKFQDLGAAYEVLSNPDKRKTYDR 88
            ::|.:|.|::||:..::|||||:||.:.|||||.|:.| |..:|:::..||||||:..||..||:
 Frog     3 EYYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDK 67

  Fly    89 CGEECLKKEGMMDHGGDPFSSFFGDFGFHF-GGDGQQQDAPRGAD-IVMDLYVS--LEELY---- 145
            .|:|.|...|...|..:|:     :|||.| ..|...:|...|.| ...||:..  .::.:    
 Frog    68 YGKEGLTGGGGGSHFDNPY-----EFGFTFRSPDDVFRDFFGGRDPFSFDLFADDPFDDFFGRRG 127

  Fly   146 --------SGNFVEIVRNKPVTKPA---------------SGTRKCNCRQEMVTRNLGPGRFQMI 187
                    .|:|:......|...|.               .|....:..........|.|.|:.:
 Frog   128 HRANRSRPGGSFLSTFGGFPAFGPTFSPFDSGFSSSFGSFGGHGGFSSFSSSSFGGSGMGNFRSV 192

  Fly   188 QQTVCDECPNVKLVNEERTLE-----IEVEQGMVDGQ-----------ETRFVAE----GEPHID 232
            ..:.  :..|.:.|..:|.:|     ||||:   |||           |...|.|    |:..:.
 Frog   193 STST--KVVNGRRVTTKRIVENGQERIEVEE---DGQLKSLTINGVADEAALVEECGRRGQNALP 252

  Fly   233 GEPGDLIVRVQQMPH-----PR--FLRKNDD 256
            .:|..........||     ||  ...|:||
 Frog   253 FQPSSSSSARTSKPHRPAGPPRHGHSYKSDD 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 78/291 (27%)
DnaJ 25..87 CDD:278647 29/62 (47%)
DnaJ_C 131..328 CDD:199909 34/183 (19%)
DnaJ_zf 160..>195 CDD:304418 5/49 (10%)
dnajb6XP_012819877.1 DnaJ 3..66 CDD:278647 29/62 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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