DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnajc24

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_021326139.1 Gene:dnajc24 / 393424 ZFINID:ZDB-GENE-040426-1153 Length:170 Species:Danio rerio


Alignment Length:176 Identity:40/176 - (22%)
Similarity:62/176 - (35%) Gaps:75/176 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ELHPDKNKDDPDAS--------TKFQDLGAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGGDPF 107
            |.||||.:  ||.|        .:|.|:..|:::|||.:.|..|:.....|..|           
Zfish    57 EFHPDKQR--PDVSEEEAEQHLQRFIDIDQAWKILSNEESRNEYNLQLRACELK----------- 108

  Fly   108 SSFFGDFGFHFGGDGQQQDAPRGADIVMDLYVSLEEL---YSGNFVEIVRNKPVTKPASGTRKCN 169
                             |..|      :|.:::|:::   |.            |:..|.|  |.
Zfish   109 -----------------QSWP------VDAHITLDDMNWDYE------------TECYSYT--CR 136

  Fly   170 CRQEMVTRNLGPGRFQMIQQTV-CDECPNVKLVNEERTLEIEVEQG 214
            |..|.:   |.....|.::..| ||.|          :|.|||::|
Zfish   137 CGGEFI---LEKDETQEVETVVCCDSC----------SLSIEVKKG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 40/176 (23%)
DnaJ 25..87 CDD:278647 15/43 (35%)
DnaJ_C 131..328 CDD:199909 20/88 (23%)
DnaJ_zf 160..>195 CDD:304418 10/35 (29%)
dnajc24XP_021326139.1 DnaJ <56..99 CDD:321979 15/43 (35%)
zf-CSL 115..167 CDD:310075 17/78 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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