DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnajc5aa

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001002464.1 Gene:dnajc5aa / 386768 ZFINID:ZDB-GENE-031113-20 Length:202 Species:Danio rerio


Alignment Length:71 Identity:31/71 - (43%)
Similarity:50/71 - (70%) Gaps:0/71 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRK 84
            |.:|...|.:|.|.|.|..:::||:||:||.:.|||||.|:|:|:.||:::..|:.:|::|.||.
Zfish    11 STSGESLYHVLGVDKVATVDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILNDPTKRN 75

  Fly    85 TYDRCG 90
            .||:.|
Zfish    76 IYDKYG 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 30/69 (43%)
DnaJ 25..87 CDD:278647 26/61 (43%)
DnaJ_C 131..328 CDD:199909
DnaJ_zf 160..>195 CDD:304418
dnajc5aaNP_001002464.1 DnaJ 16..>85 CDD:223560 29/66 (44%)
DnaJ 16..78 CDD:278647 26/61 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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