DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajc16

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001014216.1 Gene:Dnajc16 / 362652 RGDID:1359395 Length:771 Species:Rattus norvegicus


Alignment Length:279 Identity:76/279 - (27%)
Similarity:118/279 - (42%) Gaps:75/279 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLLVEESFAGRDF--YKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEV 76
            |:|:.:|.:..||  |::|.|.:.|:..::||||::||:|.|||||| ||.|..||..:..|||:
  Rat    16 LVLILQSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDKFIQISKAYEI 79

  Fly    77 LSNPDKRKTYDRCGEE------CLKKEGMMDHGGDPFSSFFGDFGFHFGGDGQQQDAPRGADIVM 135
            |||.:||..||..|:.      ..::|....|..:.|  :|.:..|||..:.:::|         
  Rat    80 LSNEEKRTNYDHYGDAGENQGYQQQREYRFRHFHENF--YFDESFFHFPFNSERRD--------- 133

  Fly   136 DLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNVKL 200
                |::|.|..:|...|                  .|:|..:........|....|..|.:::.
  Rat   134 ----SIDEKYLLHFSHYV------------------NEVVPDSFKKPYLIKITSDWCFSCIHIEP 176

  Fly   201 VNEERTLEIE---VEQGMVD-GQETRFV----AEGEPHIDG------------------------ 233
            :.:|...|:|   |..|:|. |.|.|..    |...|.|.|                        
  Rat   177 IWKEVVQELEGLGVGIGVVHAGYERRLAHHLGAHSTPSILGIINGKISFFHNAVVHENLRQFVES 241

  Fly   234 -EPGDLIVRVQQMPHPRFL 251
             .||:|:.:|....:.|||
  Rat   242 LLPGNLVEKVTNKNYVRFL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 73/271 (27%)
DnaJ 25..87 CDD:278647 32/63 (51%)
DnaJ_C 131..328 CDD:199909 30/154 (19%)
DnaJ_zf 160..>195 CDD:304418 4/34 (12%)
Dnajc16NP_001014216.1 DnaJ 29..90 CDD:278647 30/61 (49%)
TRX_DnaJ 133..242 CDD:239261 24/139 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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