DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajc24

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001178782.1 Gene:Dnajc24 / 362184 RGDID:1564710 Length:148 Species:Rattus norvegicus


Alignment Length:90 Identity:28/90 - (31%)
Similarity:49/90 - (54%) Gaps:7/90 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDAST------KFQDLGAAYEVL 77
            |....:|:|.||....:|:.:::|:.|::|....||||...|..|.|      ||.::..|:::|
  Rat     4 EQTVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSADVPAGTMEECVQKFIEIDQAWKIL 68

  Fly    78 SNPDKRKTYD-RCGEECLKKEGMMD 101
            .|.:.:|.|| :..|:.|:..|.:|
  Rat    69 GNEETKKKYDLQRHEDELRNVGPVD 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 27/87 (31%)
DnaJ 25..87 CDD:278647 21/67 (31%)
DnaJ_C 131..328 CDD:199909
DnaJ_zf 160..>195 CDD:304418
Dnajc24NP_001178782.1 DnaJ 10..78 CDD:395170 21/67 (31%)
zf-CSL 94..147 CDD:398744 28/90 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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