DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnj-13

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001366737.1 Gene:dnj-13 / 3564910 WormBaseID:WBGene00001031 Length:331 Species:Caenorhabditis elegans


Alignment Length:364 Identity:114/364 - (31%)
Similarity:169/364 - (46%) Gaps:86/364 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYD 87
            |:|:||:|.:.|.|..:|:|||||::|.:.|||||| :..|..||:::..||:|||:..|:|.||
 Worm     2 GKDYYKVLGISKGATDDEIKKAYRKMALKYHPDKNK-EAGAENKFKEIAEAYDVLSDDKKKKIYD 65

  Fly    88 RCGEECLKKEGMMDHG-----------GDP---FSSFFG---DFG------FHFGG--------- 120
            :.|||.||:.|....|           |||   ||||||   .||      |..||         
 Worm    66 QFGEEGLKEGGPGAGGGGGGGMHYEFRGDPMNIFSSFFGGSDPFGAGGPGMFDLGGGAGGPNMFF 130

  Fly   121 -----------DGQQQDAPRG-----ADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCN 169
                       .|..|...||     ..::.||.||||::..|.                |:|..
 Worm   131 MNQGGMDDGMFGGMHQGGRRGHARQDPAVLHDLSVSLEDVLKGT----------------TKKMK 179

  Fly   170 CRQEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGE 234
            ..::::|.|.     |.:               |::.|.:.::.|...|.:..|..||:.|.:..
 Worm   180 ITRKVMTDNA-----QRL---------------EDKVLTVTIKPGWKSGTKITFPKEGDQHPNRT 224

  Fly   235 PGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIR 299
            |.|::..::..|||:|.|:..|:.....|||:.||.|..:.|..|||....:....|..||...|
 Worm   225 PADIVFVIKDKPHPKFKREGSDIKRVEKISLKSALTGLDIMIPTLDGADYRLQLNDVIKPGTTRR 289

  Fly   300 KKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEAL 338
            ..|:|:||.::.:..|:|.|.||||||.: |....:|.:
 Worm   290 LTGKGLPNPKSPSHRGDLIIEFDVEFPSQ-LNPTQREVI 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 114/364 (31%)
DnaJ 25..87 CDD:278647 29/61 (48%)
DnaJ_C 131..328 CDD:199909 55/196 (28%)
DnaJ_zf 160..>195 CDD:304418 5/34 (15%)
dnj-13NP_001366737.1 DnaJ 1..331 CDD:223560 114/364 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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