DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and CG5001

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_608586.2 Gene:CG5001 / 33308 FlyBaseID:FBgn0031322 Length:350 Species:Drosophila melanogaster


Alignment Length:390 Identity:110/390 - (28%)
Similarity:169/390 - (43%) Gaps:111/390 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYD 87
            |:|:||||.:.|.|..:|:|||||:||...|||||| ..:|..||:::..||||||:..||:.||
  Fly     2 GKDYYKILGLPKTATDDEIKKAYRKLALRYHPDKNK-AANAEDKFKEVAEAYEVLSDKSKREVYD 65

  Fly    88 RCGEECLKKEGMMDHG-----------GDP---FSSFFGD------------------------- 113
            :.||:.||..|..:.|           |||   |:.|||:                         
  Fly    66 KYGEDGLKSGGTRNGGPSSNSFTYQFHGDPRATFAQFFGNSNPFASFFDMGDNLFDKKVFDLDTE 130

  Fly   114 ---FGFHFGGDG---------------------------QQQDAPRGADIVMDLYVSLEELYSGN 148
               |...|||.|                           |:||.|    :..||||:|||:|.|.
  Fly   131 PDFFSSPFGGIGSRHGLGSGFRPSFRSHSFNVHTPFKKEQKQDPP----VEHDLYVTLEEIYHGC 191

  Fly   149 FVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPNVKLVNEERTLEIEVEQ 213
            ..::..::.:.:....:||                                   ||:.|.|.::.
  Fly   192 VKKMKISRRIVQADGSSRK-----------------------------------EEKFLAISIKP 221

  Fly   214 GMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKH 278
            |...|.:..|..||:......|.|::..::..||..|.|:..||.....::|:.||.|...::..
  Fly   222 GWKSGTKVTFQKEGDQAPGKIPADIVFIIRDKPHAMFKREGSDLRYTARLTLKQALCGVVFQVPT 286

  Fly   279 LDGHLVPV-TREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKIL 342
            :.|..:.: |.:::..|....|.:|.|:|..::....|:|.:.||::||:| ||...||.||.:|
  Fly   287 MSGDKLRISTMQEIIKPNTVKRIQGYGLPFPKDTTRKGDLLVAFDIQFPEK-LTAAQKEVLKDML 350

  Fly   343  342
              Fly   351  350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 109/388 (28%)
CG5001NP_608586.2 DnaJ_bact 4..347 CDD:274090 106/383 (28%)

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