DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnaja2b

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_997830.1 Gene:dnaja2b / 324164 ZFINID:ZDB-GENE-030131-2884 Length:413 Species:Danio rerio


Alignment Length:352 Identity:132/352 - (37%)
Similarity:186/352 - (52%) Gaps:45/352 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTY 86
            |....|.:|.|..:|:.||:|||||:||||.|||||   |:|..||:::..|||||:||:|:..|
Zfish     5 ADTKLYDLLGVSPSASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLTNPEKKDLY 66

  Fly    87 DRCGEECLKKEGMMDHGG-----DPFSSFFGD--FGFHFGGDGQQQDA--PRGADIVMDLYVSLE 142
            ||.||:.|::.|    ||     |.||..||.  |||..|...:.::.  .||.|::..|.||||
Zfish    67 DRYGEQGLREGG----GGGAGMEDIFSHIFGGGLFGFMGGQSSKSRNGGRRRGEDMIHPLKVSLE 127

  Fly   143 ELYSGNFVEIVRNKPVTKPA--------SGTRKCN-CR---QEMVTRNLGPGRFQMIQQTV---- 191
            :||:|...::..:|.|...|        ...:||: ||   ..::.|.|.||..|.:|...    
Zfish   128 DLYNGKTTKLQLSKNVLCSACNGQGGKTGAVQKCSTCRGRGMRIMIRQLAPGMVQQMQSVCTDCN 192

  Fly   192 -----------CDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQM 245
                       |.||...|:..|.:.||:.|::||..||:..|..|.:...:.||||:|:.:|:.
Zfish   193 GEGEVIHEKDRCKECDGRKVCKEVKVLEVHVDKGMKHGQKITFSGEADQSPNTEPGDIILVLQEK 257

  Fly   246 PHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDG-HLV-PVTREKVTWPGARIRKKGEGMPNF 308
            .|..|.|..:||:....|.|.:||.||...:.|||| ||| .....||..||:....:|||||.:
Zfish   258 DHEEFRRDGNDLHIGHKIGLVEALCGFQFMLTHLDGRHLVIKYPPGKVVEPGSIRVVRGEGMPQY 322

  Fly   309 ENNNLTGNLYITFDVEFPKKDLTEEDK 335
            .|....|:|:|.|||:||:......:|
Zfish   323 RNPFEKGDLFIKFDVQFPENGWISTEK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 132/352 (38%)
DnaJ 25..87 CDD:278647 32/61 (52%)
DnaJ_C 131..328 CDD:199909 78/225 (35%)
DnaJ_zf 160..>195 CDD:304418 12/61 (20%)
dnaja2bNP_997830.1 PTZ00037 4..413 CDD:240236 132/352 (38%)
DnaJ 9..67 CDD:278647 32/60 (53%)
DnaJ_C 116..342 CDD:199909 78/225 (35%)
DnaJ_zf 145..211 CDD:199908 14/65 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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