DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shv and dnajb12a

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_997824.1 Gene:dnajb12a / 324005 ZFINID:ZDB-GENE-030131-2725 Length:371 Species:Danio rerio


Alignment Length:276 Identity:71/276 - (25%)
Similarity:114/276 - (41%) Gaps:63/276 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYDR 88
            :|:|:.|.|.|.|:..::|||||:||.:.||||| ..|.|:..|:.:|.||.|||||:||:.||.
Zfish   107 KDYYETLGVSKEASEEDLKKAYRKLALKFHPDKN-HAPGATEAFKAIGNAYAVLSNPEKRRQYDV 170

  Fly    89 CGEECLKKEGMMDH------------GGDPFSSFFGD----------------FGFHFGGDGQQQ 125
            .|||  |......|            ..|.|:.|||.                ||.....:.|:|
Zfish   171 YGEE--KAHPTHRHRTYHRNFEADISPEDLFNMFFGGGFPTSNVHVYSNGRMRFGHQQRHERQEQ 233

  Fly   126 DAPRGADIVMDLY-VSLEELYSGNFVEIVRNKPVT---KPASGTRKCNCRQEMVTRNLGPGRFQM 186
            ....|..:.:.|. :.:..:.|.....:|.:.|.:   :|:.|.   ..|::..|..:.    ..
Zfish   234 QREGGLALFVQLMPILILIIVSALSQMMVSSPPYSLSHRPSLGH---TSRRQTATLKVP----YY 291

  Fly   187 IQQTVCDECPNVKLVNEERTLEIEV----------EQGMVDG--QETRFVAEGEPHIDGEPGDLI 239
            :.....:|...:.|.|.|:::|.:.          |:...:|  ...|:..:         .||.
Zfish   292 VGDHFSEEYKGMNLKNVEQSVEEDYISNLRNNCWKEKQQKEGLLYRARYFGD---------ADLY 347

  Fly   240 VRVQQMPHPRFLRKND 255
            .|.|:|..|...:.:|
Zfish   348 QRAQKMATPSCSKLSD 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 71/276 (26%)
DnaJ 25..87 CDD:278647 31/61 (51%)
DnaJ_C 131..328 CDD:199909 23/141 (16%)
DnaJ_zf 160..>195 CDD:304418 4/34 (12%)
dnajb12aNP_997824.1 DnaJ 107..>211 CDD:223560 43/106 (41%)
DnaJ 108..169 CDD:278647 31/61 (51%)
DUF1977 263..363 CDD:286411 19/115 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.