DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb5

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001402881.1 Gene:Dnajb5 / 313811 RGDID:1307453 Length:420 Species:Rattus norvegicus


Alignment Length:386 Identity:119/386 - (30%)
Similarity:178/386 - (46%) Gaps:108/386 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTYD 87
            |:|:||||.:...||.:|:|||||::|.:.|||||| :|:|..||:::..||:|||:|.||..||
  Rat    74 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNK-EPNAEEKFKEIAEAYDVLSDPKKRSLYD 137

  Fly    88 RCGEECLKKEGMMDHG----------GDP---FSSFFGD-------------------------- 113
            :.|||.||..|....|          |||   |:||||.                          
  Rat   138 QYGEEGLKTGGGTSGGSGGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRSTRPFSGFDPDDMD 202

  Fly   114 ----------FGFHFGGDG----------------QQQDAPRGADIVMDLYVSLEELYSGNFVEI 152
                      || .||.:|                :.||.|    :|.:|.|||||:|.|:    
  Rat   203 VDEDEDPFGAFG-RFGFNGLSRGPRRAPEPLYPRRKVQDPP----VVHELRVSLEEIYHGS---- 258

  Fly   153 VRNKPVTKPASGTRKCNCRQEMVTRNLGP-GRFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMV 216
                  ||          |.::..|.|.| ||               .:..|::.|.|.:::|..
  Rat   259 ------TK----------RMKITRRRLNPDGR---------------TVRTEDKILHIVIKRGWK 292

  Fly   217 DGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDG 281
            :|.:..|..||:...|..|.|::..::..||..|.|...::..:..|||::||.|.::.|..:||
  Rat   293 EGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDG 357

  Fly   282 HLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKIL 342
            .::|:....|..||...|.:|||:|..:.....|:|.:.|.|.||.: ||.:.::.||:.|
  Rat   358 RVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDR-LTPQTRQILKQHL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 118/384 (31%)
Dnajb5NP_001402881.1 DnaJ_bact 76..415 CDD:274090 116/380 (31%)

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