DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajc7

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_006247373.1 Gene:Dnajc7 / 303536 RGDID:1303226 Length:579 Species:Rattus norvegicus


Alignment Length:112 Identity:44/112 - (39%)
Similarity:65/112 - (58%) Gaps:17/112 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKD-----DPDASTKFQDLGAAYEVLSNPDKR 83
            :|:||||.|.|||:.:|:|||||:.|...|||::..     ..:...||:::|.|:.:||:|.|:
  Rat   465 KDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKK 529

  Fly    84 KTYDRCGEECLKKEGMMDHGGD-----PFSSFF---GDFGFHFGGDG 122
            ..|| .|:: |.:|||  :.||     .|.:||   |.|.|...|.|
  Rat   530 TRYD-SGQD-LDEEGM--NMGDFDANNIFKAFFGGPGGFSFEASGPG 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 44/112 (39%)
DnaJ 25..87 CDD:278647 27/66 (41%)
DnaJ_C 131..328 CDD:199909
DnaJ_zf 160..>195 CDD:304418
Dnajc7XP_006247373.1 AANH_like <19..91 CDD:294206
TPR_11 112..177 CDD:290150
TPR 113..146 CDD:197478
TPR repeat 113..141 CDD:276809
TPR_17 135..167 CDD:290167
TPR repeat 146..176 CDD:276809
TPR repeat 181..209 CDD:276809
TPR repeat 230..255 CDD:276809
TPR repeat 260..290 CDD:276809
TPR 295..328 CDD:197478
TPR repeat 295..323 CDD:276809
TPR_11 342..409 CDD:290150
TPR repeat 342..369 CDD:276809
TPR repeat 374..408 CDD:276809
TPR_11 378..441 CDD:290150
TPR_1 379..412 CDD:278916
TPR repeat 413..441 CDD:276809
DnaJ 465..>554 CDD:223560 36/92 (39%)
DnaJ 466..533 CDD:278647 27/66 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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