DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajc10

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_063139350.1 Gene:Dnajc10 / 295690 RGDID:1307813 Length:834 Species:Rattus norvegicus


Alignment Length:396 Identity:95/396 - (23%)
Similarity:148/396 - (37%) Gaps:124/396 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CLVIIQLSLLLVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDL 70
            ||:::.:.:::..:    ::||.:|.|.|.|::.|:::|:::||.:||||||.::|:|...|..:
  Rat    20 CLLVLYVVIVVGTD----QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKI 80

  Fly    71 GAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGGDPFSS---FFGDFGFHFGGDGQQQDAPRGAD 132
            ..|||||.:.|.||.||:.||     :|:.|:.|..:.|   :..|||.:       .|.|   :
  Rat    81 NRAYEVLKDEDLRKKYDKYGE-----KGLEDNQGGQYESWSYYRYDFGIY-------DDDP---E 130

  Fly   133 IV------MDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKC----------------------- 168
            |:      .|..|:..||:..||.           :.|...|                       
  Rat   131 IITLERREFDAAVNSGELWFVNFY-----------SPGCSHCHDLAPTWREFAKEVDGLLRIGAV 184

  Fly   169 NCRQE-MVTRNLG----PGRF----QMIQQTVCDECPNVKLVN----EERTLEIEVEQG-MVDGQ 219
            ||..: |:.|..|    |..|    .|.......:.....||:    ..||...|:..| .|:..
  Rat   185 NCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVSFAMQHVRTTVTELSTGNFVNAI 249

  Fly   220 ETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTN------------------VTISLQ 266
            ||.|.|        ..|.||.         |..|.:|..|.                  |....|
  Rat   250 ETAFAA--------GIGWLIT---------FCFKGEDCLTPQTRLRLSGMLDGLVNVGWVDCDTQ 297

  Fly   267 DALVGFSMEIKHLDGHLVPVTREKVTW--PGARIRKKGEGMPNFENNNLTGNLYITFDVEFPKKD 329
            |:|      .|.||     .|.....:  |||.:..|.:....|.|:.....:|:......|..:
  Rat   298 DSL------CKSLD-----ATASTTAYFPPGATLNNKEKSSVLFLNSLDAKEIYMEIIHNLPDFE 351

  Fly   330 LTEEDK 335
            |...:|
  Rat   352 LLSANK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 93/377 (25%)
Dnajc10XP_063139350.1 None

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