DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and psi1

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_588477.1 Gene:psi1 / 2539002 PomBaseID:SPCC830.07C Length:379 Species:Schizosaccharomyces pombe


Alignment Length:412 Identity:112/412 - (27%)
Similarity:161/412 - (39%) Gaps:135/412 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNPDKRKTY 86
            |....|..|.|:..|:..|:|||||:||.:.|||||   |:...||:::..||||||:|.:||.|
pombe     3 ADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKN---PNGEKKFKEISLAYEVLSDPQRRKLY 64

  Fly    87 DRCG-----------------------------------------------------EECLKK-- 96
            |:.|                                                     .:..::  
pombe    65 DQYGITEGNAAPPPPGAEGGPGAGFGGFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERVF 129

  Fly    97 -----------------EGMMDH-------------GGDP--FSSFFGDFGF---------HFGG 120
                             .||.|.             ||.|  |::.||..|.         .|||
pombe   130 GHAFAGGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSFGG 194

  Fly   121 DGQQQDAPRGADIVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQ 185
            ....|...:...|...|.||||:|::|                      |.::|           
pombe   195 SRPSQPPAQNEVITRPLNVSLEDLFTG----------------------CTKKM----------- 226

  Fly   186 MIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRF 250
            .|.:.:.|  .:.:.|..:|.|||:|:.|...|.:.:|..||:...||...|:...:.:.|||.|
pombe   227 KISRHIID--ASGQSVKADRILEIKVKPGWKAGTKIKFAGEGDEKPDGTVQDIQFVLAEKPHPVF 289

  Fly   251 LRKNDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTG 315
            .|..|||...|.:||::||:|||.:|..:||..:.|:....|.||..|...|.|||..:|.:..|
pombe   290 TRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGFGMPLPKNPSQRG 354

  Fly   316 NLYITFDVEFPKKDLTEEDKEA 337
            |:.|...|:|| .:||...|.|
pombe   355 NMIIECKVKFP-TELTPAQKTA 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 111/409 (27%)
psi1NP_588477.1 DnaJ_bact 8..379 CDD:274090 111/407 (27%)
DnaJ_C 207..368 CDD:199909 61/196 (31%)

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