DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and CG30156

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_724520.1 Gene:CG30156 / 246488 FlyBaseID:FBgn0050156 Length:358 Species:Drosophila melanogaster


Alignment Length:292 Identity:70/292 - (23%)
Similarity:120/292 - (41%) Gaps:64/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNP 80
            :|::....|:.|::|.:..:|..:|||:||.:||..||||||| .|.|...|:.:..|.:.|::.
  Fly    87 VVQKVLRCRNHYEVLRISHHATYSEVKRAYHKLALRLHPDKNK-SPGAEQAFRRISEAADCLTDC 150

  Fly    81 DKRKTYD--RCGEECLKKEGMMDHGGDP--FSSFFGDFGFH--FGGD-GQQQDAP-RGADIVMDL 137
            .||..|:  ....:|        |..||  :..:.|:..|:  .|.| |.....| |||:..|..
  Fly   151 QKRIEYNIATAVGDC--------HDQDPSQYKDYRGESEFNEANGNDLGAAFRRPYRGANQRMPQ 207

  Fly   138 YVSL---EELYSG-----NFVEIVRNKPVTKPASG---TRKCNCRQEMVTRNLGPGRFQMIQQTV 191
            ..||   ::|..|     .|:.:..:.....||..   ||..:.|:...|.::.    ..:..|.
  Fly   208 RQSLYQTQQLVIGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARRLSRTNHIA----YYMNPTT 268

  Fly   192 CDECPNVKLVNEERTLEIEVEQGMVDG-----------QETRFVAEGEPHIDGEPGDLIVRVQQM 245
            ..:....:|..    ||:|:|:..:..           ::..|:...:.:.|.:   |:..|.||
  Fly   269 LSKYTEQQLAE----LEVEIEEVYISDLKHKCRQERSWRDNLFLRARQGNNDQK---LLQHVSQM 326

  Fly   246 P--------------HPRFLRKNDDLYTNVTI 263
            .              |.|.|.:|:.|..:|.:
  Fly   327 STPACQALLQLGKSGHSRLLLENESLNQDVPV 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 68/283 (24%)
CG30156NP_724520.1 PRK14296 95..>227 CDD:237666 44/140 (31%)
DnaJ 96..157 CDD:395170 24/61 (39%)
DUF1977 238..334 CDD:462754 18/106 (17%)

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