DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnj-3

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_506711.1 Gene:dnj-3 / 182084 WormBaseID:WBGene00001021 Length:191 Species:Caenorhabditis elegans


Alignment Length:76 Identity:22/76 - (28%)
Similarity:42/76 - (55%) Gaps:12/76 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTK------------FQDLGAAYEV 76
            :::|:|:.|..:|...|::.|:.:..|:||||:::....:.::            |..:..||:|
 Worm    17 KNYYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKEAYDV 81

  Fly    77 LSNPDKRKTYD 87
            |.|.:|||.||
 Worm    82 LRNEEKRKEYD 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 22/76 (29%)
DnaJ 25..87 CDD:278647 20/73 (27%)
DnaJ_C 131..328 CDD:199909
DnaJ_zf 160..>195 CDD:304418
dnj-3NP_506711.1 DnaJ_bact 19..>92 CDD:274090 20/72 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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