DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and dnj-20

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001370249.1 Gene:dnj-20 / 174514 WormBaseID:WBGene00001038 Length:355 Species:Caenorhabditis elegans


Alignment Length:353 Identity:213/353 - (60%)
Similarity:264/353 - (74%) Gaps:7/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IIQLSLLLVEESF-----AGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQ 68
            |:.:|||::..|.     .||||||||.|.||||.|::|||||:||||||||:|:||..|:.|||
 Worm     3 ILNVSLLVLASSLVAFVECGRDFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQ 67

  Fly    69 DLGAAYEVLSNPDKRKTYDRCGEECLKKEGMMDHGG-DPFSSFFGDFGFHFGGDGQQQDAPRGAD 132
            ||.:||||||:.:||..|||.|||.:.|.|....|| ||||||||||....||.|.::..|:|||
 Worm    68 DLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFSSFFGDFFGGGGGHGGEEGTPKGAD 132

  Fly   133 IVMDLYVSLEELYSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPGRFQMIQQTVCDECPN 197
            :.:||:|:|||:|:|:||||.|.|.|.|..||||:||||.||.|..:|.|||||.|..|||||||
 Worm   133 VTIDLFVTLEEVYNGHFVEIKRKKAVYKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKVCDECPN 197

  Fly   198 VKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPHPRFLRKNDDLYTNVT 262
            ||||.|.:.||:|||.|..:|.:..|..||||||:|:||||..:::...||||.||.||||||||
 Worm   198 VKLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVT 262

  Fly   263 ISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKGEGMPNFENNNLTGNLYITFDVEFPK 327
            |||||||.||.|||:|||||:|.|.|:||||||||:|||.||||:.|:||..|.|.:||||||||
 Worm   263 ISLQDALNGFEMEIQHLDGHIVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPK 327

  Fly   328 KDLTEEDKEALKKILDQSSIN-RIYNGL 354
            .:|::|.|..:.:||.|:::. :.||||
 Worm   328 TELSDEQKAQIIEILQQNTVKPKAYNGL 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 204/324 (63%)
DnaJ 25..87 CDD:278647 42/61 (69%)
DnaJ_C 131..328 CDD:199909 128/196 (65%)
DnaJ_zf 160..>195 CDD:304418 22/34 (65%)
dnj-20NP_001370249.1 DnaJ 23..350 CDD:223560 203/326 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167692
Domainoid 1 1.000 265 1.000 Domainoid score I1006
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9464
Inparanoid 1 1.050 424 1.000 Inparanoid score I982
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53793
OrthoDB 1 1.010 - - D391896at33208
OrthoFinder 1 1.000 - - FOG0007426
OrthoInspector 1 1.000 - - oto18683
orthoMCL 1 0.900 - - OOG6_105068
Panther 1 1.100 - - LDO PTHR44298
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2491
SonicParanoid 1 1.000 - - X5560
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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