DRSC/TRiP Functional Genomics Resources

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Protein Alignment shv and Dnajb3

DIOPT Version :9

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_032325.2 Gene:Dnajb3 / 15504 MGIID:1306822 Length:242 Species:Mus musculus


Alignment Length:267 Identity:77/267 - (28%)
Similarity:112/267 - (41%) Gaps:66/267 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKD-DPDASTKFQDLGAAYEVLSNPDKRKTYDR 88
            |:|::|.|.:.|:...::||||:||.:.|||||.: ..:|..:|:.:..||||||:..||:.|||
Mouse     3 DYYEVLGVPRQASAEAIRKAYRKLALKWHPDKNPEHKEEAERRFKQVAQAYEVLSDVRKREVYDR 67

  Fly    89 CGEECLKKEGMMDHGG-----------------DP---FSSFFG---DFGF-HFGGD------GQ 123
            |||     .|.:..||                 ||   |..|||   .|.| .||||      |.
Mouse    68 CGE-----VGEVGGGGAAGSPFHDAFQYVFSFRDPAEVFREFFGGHDPFSFDFFGGDPLENFFGD 127

  Fly   124 QQDA----PRGADIVMDLYVSLEEL--YSGNFVEIVRNKPVTKPASGTRKCNCRQEMVTRNLGPG 182
            ::..    .|||   :....|..|.  :.|.|..:  :...|...|..........|.......|
Mouse   128 RRSTRGSRSRGA---VPFSTSFTEFPGFGGGFASL--DTGFTSFGSPGNSGLSSFSMSCGGGAAG 187

  Fly   183 RFQMIQQTVCDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDLIVRVQQMPH 247
            .::.:..:.  |..|.|.:..:|.:|        :|||...|.|     |||...||:..::   
Mouse   188 NYKSVSTST--EIINGKKITTKRIVE--------NGQERVEVEE-----DGELKSLIINGKE--- 234

  Fly   248 PRFLRKN 254
             :.||.|
Mouse   235 -QLLRIN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ 22..346 CDD:223560 77/267 (29%)
DnaJ 25..87 CDD:278647 26/62 (42%)
DnaJ_C 131..328 CDD:199909 27/126 (21%)
DnaJ_zf 160..>195 CDD:304418 3/34 (9%)
Dnajb3NP_032325.2 DnaJ 3..66 CDD:278647 26/62 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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