DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shv and Droj2

DIOPT Version :10

Sequence 1:NP_608525.1 Gene:shv / 33220 FlyBaseID:FBgn0031256 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_316024.4 Gene:Droj2 / 1276654 VectorBaseID:AGAMI1_002188 Length:400 Species:Anopheles gambiae


Alignment Length:370 Identity:118/370 - (31%)
Similarity:177/370 - (47%) Gaps:67/370 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVEESFAGRDFYKILNVKKNANTNEVKKAYRRLAKELHPDKNKDDPDASTKFQDLGAAYEVLSNP 80
            :|:|:    .||.:|.||...:..::|||||:||.:.|||||   |:...:|:.:..||||||:|
Mosquito     1 MVKET----GFYDVLGVKPGCSPEDLKKAYRKLAMKYHPDKN---PNEGERFKAISMAYEVLSDP 58

  Fly    81 DKRKTYDRCGEECLKKEGMMDHGGDPFSSFFGDFGFHF-GGDGQQQDAPRGADIVMDLYVSLEEL 144
            :|:..||..||..:|:.|.   ||..|.|....|.... ||.|..:...||.|:|..|.|:||||
Mosquito    59 EKKAIYDEGGEAAIKQGGA---GGGGFHSPMDIFDMLINGGMGGGRREQRGRDLVHRLTVTLEEL 120

  Fly   145 YSGNFVEIVRNKPV-----------------TKPASGTRKCNCRQEMVTR--NLGPGRFQMIQQT 190
            |||...::...|.|                 ..|.:||       .::|:  ::.||..|  |..
Mosquito   121 YSGATRKLSLQKSVICDGCDGIGGKRGTVHKCVPCNGT-------GILTKVHHIMPGFMQ--QNK 176

  Fly   191 V-----------------CDECPNVKLVNEERTLEIEVEQGMVDGQETRFVAEGEPHIDGEPGDL 238
            |                 |.:|...|.|.:::.|::.:|:||.|||:..|..||:.....:|||:
Mosquito   177 VPCRACQGQGEVFDEKHKCKKCDGQKKVRDKKILDVHIEKGMRDGQKIVFSGEGDQEPGLQPGDI 241

  Fly   239 IVRVQQMPHPRFLRKNDDLYTNVTISLQDALVGFSMEIKHLDGHLVPVTREKVTWPGARIRKKG- 302
            ::.:::.|||.|.|...||...:.:.|.:||.||...|..||...:.:|    :.||..|:... 
Mosquito   242 VIALEERPHPVFKRSGKDLMMEMRLELSEALCGFQKVITTLDKRSLVIT----SMPGEVIKHSAF 302

  Fly   303 -----EGMPNFENNNLTGNLYITFDVEFPKKDLTEEDKEALKKIL 342
                 ||||.::|....|.|.:.|.|.|| ..|..|..:.|::.|
Mosquito   303 KCIMDEGMPQWKNPFEKGRLIMQFRVVFP-DSLPGEAAKLLEQYL 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shvNP_608525.1 DnaJ_bact 25..345 CDD:274090 116/361 (32%)
Droj2XP_316024.4 PTZ00037 2..398 CDD:240236 118/369 (32%)

Return to query results.
Submit another query.