DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and SCARB2

DIOPT Version :9

Sequence 1:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_005497.1 Gene:SCARB2 / 950 HGNCID:1665 Length:478 Species:Homo sapiens


Alignment Length:473 Identity:147/473 - (31%)
Similarity:241/473 - (50%) Gaps:46/473 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KCCGETQRKVWVFGLGSVFLLL-----GILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIP 63
            :||        .:..|::.|||     .:|:...:....|..:|..:.|:.||:|::||.:.|:|
Human     3 RCC--------FYTAGTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLP 59

  Fly    64 IYLSFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDN-ATVAYYERRTWFFDPER 127
            :|..||.||.||||:|...: .|...|:||||:.|...|.|..|.|| .|::....:.:.|:.::
Human    60 VYTQFYFFNVTNPEEILRGE-TPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQ 123

  Fly   128 SNGTLD-DMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNIT 191
            |.|... |::...:....||.:  ..|...:::||..||.....||:||..|.|.:: ||:|.|.
Human   124 SVGDPKIDLIRTLNIPVLTVIE--WSQVHFLREIIEAMLKAYQQKLFVTHTVDELLW-GYKDEIL 185

  Fly   192 DFLNLFNTTKIDI-PYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFY-EM 254
            ..:::|   :.|| ||  ||...::|.  |.||.:...||.|...|..::..||||:...:: ..
Human   186 SLIHVF---RPDISPY--FGLFYEKNG--TNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITD 243

  Fly   255 PCGIVNGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYEN-HGLTATKWVGTEETLDSGEN 318
            .|.::|||.||.|.|.:..::.:.:|.:|.||.:.: ....||: .||.|.::....|.|   .|
Human   244 KCNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYI-TFSDYESVQGLPAFRYKVPAEIL---AN 304

  Fly   319 YPNQACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFL 383
            ..:.|.||...  ..|..:||:....|::.|||..||||||.||:.:|.|:.||.|.:|.||.|:
Human   305 TSDNAGFCIPE--GNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFV 367

  Fly   384 AVEPITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASKAKLAIN-- 446
            .:.|:||:.::...|.|||:.::..|||.....::.::.|:.:.::...:..|.||:.|..||  
Human   368 DINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKETASRLKSMINTT 432

  Fly   447 ---------LSSYGIIFG 455
                     :.:.|:.||
Human   433 LIITNIPYIIMALGVFFG 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_001245823.1 CD36 19..470 CDD:307331 145/458 (32%)
SCARB2NP_005497.1 CD36 28..455 CDD:307331 140/440 (32%)
Important for interaction with GBA 155..191 14/36 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.880

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