DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and SCARB1

DIOPT Version :9

Sequence 1:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens


Alignment Length:477 Identity:141/477 - (29%)
Similarity:235/477 - (49%) Gaps:31/477 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CGETQRKVWVFG-LGSVFLL---LGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYL 66
            |....|  |..| ||...||   ||.:::|..|.:....|...:.:.|.:.::..|.|.|||.||
Human     3 CSAKAR--WAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYL 65

  Fly    67 SFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNGT 131
            |.|.|:..||.:|...: ||...|.|||.:.|...|.|.||.:|.||::.|.||:.|.|.:|:|:
Human    66 SVYFFDVMNPSEILKGE-KPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGS 129

  Fly   132 LDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNL 196
            ..|.:...:.:....|..|.::...:|.|:.......|.:.::.:.||| |..||:|.:.:.:|.
Human   130 ESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGE-IMWGYKDPLVNLINK 193

  Fly   197 FNTTKIDIPYK-RFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIV 259
            :....  .|:| :||..|:.|.|  ..||||:.||..:||.:..:..|||.|:..|:.. .|.::
Human   194 YFPGM--FPFKDKFGLFAELNNS--DSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNMI 254

  Fly   260 NGTTGDMFPPKMNVNDEITIFATDACRFMNL--RPRGTYENHGLTATKWVGTEETLDSGENYPNQ 322
            |||:|.|:||.|.....:..::.:|||.|.|  :..|.:|  |:...::|..:....:|..||..
Human   255 NGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFE--GIPTYRFVAPKTLFANGSIYPPN 317

  Fly   323 ACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEP 387
            ..||      .|.::|:.....||..||::.|.|||..||....:||:|:.|.:|.|..||.:.|
Human   318 EGFC------PCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSLFLDIHP 376

  Fly   388 ITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSE----LASKAKLAINLS 448
            :||:|:....::|:::.::..........::.|::|:.||.:...:..|    ..::..|...:.
Human   377 VTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQLVLMPKVM 441

  Fly   449 SYGIIFGYSMIAFASVFLITGI 470
            .|.   .|.::|...|.|:..:
Human   442 HYA---QYVLLALGCVLLLVPV 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_001245823.1 CD36 19..470 CDD:307331 136/461 (30%)
SCARB1NP_001354910.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148206
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21132
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.860

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