DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crq and cd36

DIOPT Version :9

Sequence 1:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001002363.1 Gene:cd36 / 436636 ZFINID:ZDB-GENE-040718-55 Length:465 Species:Danio rerio


Alignment Length:484 Identity:133/484 - (27%)
Similarity:235/484 - (48%) Gaps:40/484 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCGETQRKVWVFG--LGSVFLLLGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLS 67
            ||  .||...:.|  ||::..|||.:::.....|..|.|.....|:.||.|:::|....|.:|..
Zfish     3 CC--DQRCALITGAVLGALIALLGGILIPVGDMIIKNTVHKETVLENGTLAFDTWTSVDIAMYRQ 65

  Fly    68 FYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKH-KKENYTFYDNATVAYYERRTWFFDPERSNGT 131
            |::||..||:.:.:...||..|:.||||:..:: .|.|.||.||.||::.......|:|..|.|:
Zfish    66 FWIFNVENPDKVLSEGSKPVLVQKGPYTYRVRYIPKTNITFNDNNTVSFVLPAGATFEPSMSVGS 130

  Fly   132 LDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQD-NITDFLN 195
            .:|:.|:.:...|.|      .|.|..|:.::::...|..|:..:.|.|.:: ||:| .:...:.
Zfish   131 EEDVFTSLNLAVAGV------YRLIGPKLADWLIRSSGSSLFQNRTVKELLW-GYKDPMLNSLVG 188

  Fly   196 LFNTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFY-EMPCGIV 259
            .|      .||..           |.||.:|:.||.|||:.:..:..|.|::...:: :..|..:
Zfish   189 AF------YPYNG-----------TVDGPYTVFTGKDDINKVAIIERWQGETSVNYWNDSYCDKI 236

  Fly   260 NGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHGLTATKWVGTEETLDSGENYPNQAC 324
            ||:.|..|.|.::..:.:..|:.|.||.::.....|....|:...:::...:.|.|..:.|:..|
Zfish   237 NGSDGSSFHPFLDKKEPLYFFSPDICRSISAEYEATVNLKGIDVYRYLLPVDALASPVSNPDNMC 301

  Fly   325 FC-DEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEPI 388
            :| |......|...|:::..:|:. .|::.|.|||..|.......|.||.|..::|..||.||||
Zfish   302 YCTDHEITRNCTLAGLLDITSCKG-TPVFISLPHFLYASIELQQGVVGMNPNLDEHSIFLDVEPI 365

  Fly   389 TGVPVQVHGRIQINMMIEPDDDFDIYRGVQK-VLMPMFWFDQYAELSSELASKAKLAINLSSYGI 452
            ||..::...|:|:|||..|.||..:...::: .::|:.|.::.|.|..|.|...|..: :|...:
Zfish   366 TGFTLRFSKRLQVNMMYGPSDDIALLNKIKEHTIIPILWLNETAVLDDETAKMFKNEL-ISRMDM 429

  Fly   453 IFGYS---MIAFASVFL--ITGITLTVTK 476
            :.|..   ::..:::||  :.|:.:..:|
Zfish   430 LEGLQIGLLVTGSAIFLGCMIGLIVVCSK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_001245823.1 CD36 19..470 CDD:307331 125/460 (27%)
cd36NP_001002363.1 CD36 17..450 CDD:279474 125/458 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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