DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crq and scarb1

DIOPT Version :9

Sequence 1:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:XP_017213428.1 Gene:scarb1 / 387260 ZFINID:ZDB-GENE-031126-1 Length:511 Species:Danio rerio


Alignment Length:470 Identity:147/470 - (31%)
Similarity:242/470 - (51%) Gaps:24/470 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LGSVFLLLGILIVVFWPGIADNLVEDGLTLKPGTD-AYESWLEAPIPIYLSFYMFNWTNPEDIRN 81
            ||.:.||.|.::|...|.|.|:.:...:.:.|..| :|..|.:.|:|.::|.|.|:..||::|..
Zfish    14 LGGMALLFGTVLVFVGPIIIDDQIVKNVEINPKNDLSYTMWKDIPVPFFMSVYFFHIVNPDEILK 78

  Fly    82 PDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNGTLDDMVTAAHAITATV 146
            .: :|..::.|||.:.|...|:|.||::|.||:|.|.|.:||:...|.|...|:||..:.:....
Zfish    79 GE-RPMVIQRGPYVYRENRWKDNITFHENHTVSYKEYRQYFFEESMSVGDESDVVTIPNMLVLGA 142

  Fly   147 ADEMRDQRKIVKKIIN--FMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNLFNTTKIDIPYKRF 209
            :..|.:....|:.:::  |...:||.  ::||||||.:: ||...:.||||.:....:....| |
Zfish   143 SVMMENMPFPVRLLLSTTFKTFNEGP--FLTKPVGELMW-GYDSKLVDFLNKYLPGMLPSSGK-F 203

  Fly   210 GWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIVNGTTGDMFPPKMNV 273
            |..||.|.|.|  |||||.||.|||..:..:..|||.....::.. .|.::|||.|.|:||.|..
Zfish   204 GLFADFNNSNT--GLFTIFTGRDDIRKVHMVDSWNGLKNVDYWRSDQCNMINGTAGQMWPPFMTK 266

  Fly   274 NDEITIFATDACRFMNLRPRGTYENHGLTATKWVGTEETLDSGENYPNQACFCDEARFDECPKTG 338
            ...:..::.||||.|.|..:....:.|:...::|..:....:|.::|....||      .|.::|
Zfish   267 ETTMPFYSPDACRSMELVYQRPLVSSGIPVYRYVSPKTLFANGADFPPNEGFC------PCRQSG 325

  Fly   339 VVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEPITGVPVQVHGRIQINM 403
            ::...:||..:|.:.|.||||.||...:|.|||:.|.:::|..|:.:.|.|||||.|..|:|:|:
Zfish   326 LLNVSSCRHGSPTFISQPHFYNADPQLLDTVSGLSPSEDEHGLFIDIHPETGVPVNVSVRLQLNL 390

  Fly   404 MIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSEL--ASKAKLAI--NLSSYGIIFGYSMIAFASV 464
            .::..........:.:|:|||.||::...:...:  ..:..|.:  .:..|   ..|..||....
Zfish   391 FLKKVSGISETGNIAEVVMPMLWFEESGYIDGPVLHTFRTNLVVLPKVMEY---MQYIFIALGLA 452

  Fly   465 FLITGITLTVTKKWV 479
            .::|.:.|.:|.|.|
Zfish   453 AILTAVILFLTDKKV 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_001245823.1 CD36 19..470 CDD:307331 142/458 (31%)
scarb1XP_017213428.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582134
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21132
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.960

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