DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and scarb2c

DIOPT Version :10

Sequence 1:NP_787957.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001352071.1 Gene:scarb2c / 337532 ZFINID:ZDB-GENE-030131-5789 Length:478 Species:Danio rerio


Alignment Length:470 Identity:139/470 - (29%)
Similarity:237/470 - (50%) Gaps:34/470 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCGETQRKVWVFGLGSVFLLLGILIVV--FWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLS 67
            ||..|...:.|     :.|:.||.:.:  ....:.:|.|:..:.|:.||:|:..|...|.|:|:.
Zfish     6 CCVSTAGALCV-----LLLICGIALELTRVLQKLVNNTVKQQIVLENGTEAFSVWQNPPPPVYMQ 65

  Fly    68 FYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNAT-VAYYERRTWFFDPERSNGT 131
            ||.||.|||.::.:.| ||:.|::||||:.|....|...|.||.| ||....:|:.|:|..|.|:
Zfish    66 FYFFNLTNPAEVMSGD-KPSVVQIGPYTYREYRPMEEVKFMDNGTRVAAINPKTYVFEPNMSRGS 129

  Fly   132 LDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNL 196
            .||:|...:....||.::.:|  .|:.::|:.::..:|..::.|..||:.:: ||:|.:...|::
Zfish   130 QDDLVRTVNIPAVTVMEKYKD--SILARLISDLMKAKGVGVFETFRVGDLLW-GYEDPLLKELHM 191

  Fly   197 FNTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIVN 260
            .      :|...||....:| ...||. :.:.||..|..:...:..|||:....::.. .|.::|
Zfish   192 L------VPDDHFGLFYKKN-GTEYDS-YVLLTGKPDYQDFASIDEWNGQRSLNWWSSEECNMIN 248

  Fly   261 GTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHGLTATKWVGTEETLDSGENYPNQACF 325
            ||.|..|.|.:...|.:.||::|.||.:.::........|:...::|...:...|.:..|:.|.|
Zfish   249 GTDGASFHPIITKADRLYIFSSDLCRSLYVQYECDVSVQGVPGFRFVPPADVFSSPDINPDNAGF 313

  Fly   326 CDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEPITG 390
            |...  ..|..:|::....|:..|||..|.||||.|||.:||.:.||||.||:|:.|..:.|:||
Zfish   314 CVPP--GHCLGSGLLNASVCKQGAPIIMSSPHFYQADQKFVDDIWGMKPIKEEHQTFADINPLTG 376

  Fly   391 VPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASK-------AKLAINLS 448
            :.:|...|:|:|:.::....|.....:|.::.|:.:.::.|.:..|.|.|       |.:.||:.
Zfish   377 IVLQGAKRVQVNVYLQQHSSFSQTGKIQTLVFPVMYINESAFIDEESAKKLHAVVLNANVVINIP 441

  Fly   449 ----SYGIIFGYSMI 459
                |.||:.|...|
Zfish   442 FIVISVGILLGIIFI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_787957.1 CD36 17..473 CDD:460076 135/458 (29%)
scarb2cNP_001352071.1 CD36 13..459 CDD:460076 136/463 (29%)

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