DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crq and Cd36

DIOPT Version :10

Sequence 1:NP_787957.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_113749.2 Gene:Cd36 / 29184 RGDID:2301 Length:472 Species:Rattus norvegicus


Alignment Length:501 Identity:123/501 - (24%)
Similarity:235/501 - (46%) Gaps:75/501 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CCKCCGETQRKVWVFGLGSVFLLLGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYL 66
            |.:.||.....|    :|:|..:.|.:::.....:.:..::..:.|:.||.|:::|::....:|.
  Rat     3 CDRNCGLITGAV----IGAVLAVFGGILMPVGDLLIEKTIKREVVLEEGTIAFKNWVKTGTTVYR 63

  Fly    67 SFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKH-KKENYTFYD--NATVAYYERRTWFFDPERS 128
            .|::|:..|||::.....|....:.||||:..:: .|||.| .|  ::||::.:.....|:|..|
  Rat    64 QFWIFDVQNPEEVAKNSSKIKVKQRGPYTYRVRYLAKENIT-QDPKDSTVSFVQPNGAIFEPSLS 127

  Fly   129 NGTLDDMVT--------AAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEG 185
            .||.:|..|        |.|..|          ...|:.::|.::......::.|:.:.|.:: |
  Rat   128 VGTENDNFTVLNLAVAAAPHIYT----------NSFVQGVLNSLIKKSKSSMFQTRSLKELLW-G 181

  Fly   186 YQDNITDFLNLF-----NTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNG 245
            |:|   .||:|.     .|..:..||..           |.||::.:..|.|:||.:..:..:.|
  Rat   182 YKD---PFLSLVPYPISTTVGVFYPYNN-----------TVDGVYKVFNGKDNISKVAIIDTYKG 232

  Fly   246 KSETGFYEMPCGIVNGTTGDMFPPKMNVNDEITIFATDACRF--------MNLRPRGTYENHGLT 302
            |....::|..|.::|||....|||.:..:..:..|::|.||.        :||:        |:.
  Rat   233 KRNLSYWESYCDMINGTDAASFPPFVEKSRTLRFFSSDICRSIYAVFGSEVNLK--------GIP 289

  Fly   303 ATKWVGTEETLDSGENYPNQACFCDEARF-DECPKTGVVECKACRDKAPIYSSFPHFYLADQSYV 366
            ..::|.......|....|:..|||.|... :.|...||::...|::..|:|.|.|||..|.....
  Rat   290 VYRFVLPANAFASPLQNPDNHCFCTEKVISNNCTSYGVLDIGKCKEGKPVYISLPHFLHASPDVS 354

  Fly   367 DAVSGMKPEKEKHEFFLAVEPITGVPVQVHGRIQINMMIEPDDDFDIYRGVQK-VLMPMFWF--- 427
            :.:.|:.|.:::|..:|.||||||..:|...|:|:|::::|....:..:.::: .::|:.|.   
  Rat   355 EPIEGLNPNEDEHRTYLDVEPITGFTLQFAKRLQVNILVKPARKIEALKNLKRPYIVPILWLNET 419

  Fly   428 ----DQYAEL-SSELASKAKLAINLSSYGIIFGYSMIAFASVFLIT 468
                |:.||: .:::..|.|| :.|... ::.|..::.|.: |:|:
  Rat   420 GTIGDEKAEMFRNQVTGKIKL-LGLVEM-VLLGVGVVMFVA-FMIS 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_787957.1 CD36 17..473 CDD:460076 119/486 (24%)
Cd36NP_113749.2 CD36 14..463 CDD:460076 120/490 (24%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000250 93..120 7/27 (26%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 1/3 (33%)

Return to query results.
Submit another query.