DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and Scarb1

DIOPT Version :10

Sequence 1:NP_787957.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_113729.1 Gene:Scarb1 / 25073 RGDID:2302 Length:509 Species:Rattus norvegicus


Alignment Length:432 Identity:135/432 - (31%)
Similarity:219/432 - (50%) Gaps:24/432 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GETQRKVWV-FGLGSVFLL---LGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLS 67
            |.:.|..|| .|||.:.||   ||:::::..|.:....|...:.:.|.:.::..|.|.|:|.|||
  Rat     2 GVSSRARWVALGLGVLGLLCAALGVIMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLS 66

  Fly    68 FYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNGTL 132
            .|.|...||.::.|.. ||...|.|||.:.|..:|.|.||.||.||:|.|.|:..|.|:||.|:.
  Rat    67 VYFFEVVNPSEVLNGQ-KPVVRERGPYVYREFRQKVNITFNDNDTVSYIENRSLRFQPDRSQGSE 130

  Fly   133 DDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNLF 197
            .|.:...:.:....|..|.|:...:|.::...|...|.:.::.:.||| |..||:|...:||:.:
  Rat   131 SDYIVLPNILVLGGAVMMEDKPTSLKLLMTLGLVTMGQRAFMNRTVGE-ILWGYEDPFVNFLSKY 194

  Fly   198 NTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIVNG 261
            ......|..| ||.....|:|.:  |:||:.||..:.|.:..:..|||.||..::.. .|.::||
  Rat   195 FPDMFPIKGK-FGLFVGMNDSSS--GVFTVFTGVQNFSKIHLVDKWNGLSEVNYWHSEQCNMING 256

  Fly   262 TTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYEN----HGLTATKWVGTEETLDSGENYPNQ 322
            |.|.|:.|.|.....:..|:.:|||.|.|    ||:.    .|:...::...:....:|..||..
  Rat   257 TAGQMWAPFMTPESSLEFFSPEACRSMKL----TYQESRVFEGIPTYRFTAPDTLFANGSVYPPN 317

  Fly   323 ACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEP 387
            ..||      .|.::|:.....||..||::.|.||||.||....:||.|:.|:.::|..||.:.|
  Rat   318 EGFC------PCRESGIQNVSTCRFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHP 376

  Fly   388 ITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQ 429
            :||:|:....::|:::.|:..........::.|::|:.||:|
  Rat   377 VTGIPMNCSVKMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQ 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_787957.1 CD36 17..473 CDD:460076 131/421 (31%)
Scarb1NP_113729.1 CD36 21..447 CDD:460076 126/413 (31%)

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