DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and Scarb1

DIOPT Version :10

Sequence 1:NP_787957.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001192012.1 Gene:Scarb1 / 20778 MGIID:893578 Length:520 Species:Mus musculus


Alignment Length:485 Identity:138/485 - (28%)
Similarity:234/485 - (48%) Gaps:25/485 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GETQRKVWV-FGLGSVFLL---LGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLS 67
            |.:.|..|| .|||::.||   ||:::::..|.:....|...:.:.|.:.::..|.|.|:|.|||
Mouse     2 GGSSRARWVALGLGALGLLFAALGVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLS 66

  Fly    68 FYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNGTL 132
            .|.|...||.::.|.. ||...|.|||.:.|..:|.|.||.||.||::.|.|:..|.|::|:|:.
Mouse    67 VYFFEVVNPNEVLNGQ-KPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHGSE 130

  Fly   133 DDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLNLF 197
            .|.:...:.:....:..|..:...:|.::...|...|.:.::.:.||| |..||.|....|||.:
Mouse   131 SDYIVLPNILVLGGSILMESKPVSLKLMMTLALVTMGQRAFMNRTVGE-ILWGYDDPFVHFLNTY 194

  Fly   198 NTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIVNG 261
            ....:.|..| ||.....|.|  ..|:||:.||..:.|.:..:..|||.|:..::.. .|.::||
Mouse   195 LPDMLPIKGK-FGLFVGMNNS--NSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMING 256

  Fly   262 TTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYEN----HGLTATKWVGTEETLDSGENYPNQ 322
            |:|.|:.|.|.....:..|:.:|||.|.|    ||..    .|:...::...:....:|..||..
Mouse   257 TSGQMWAPFMTPESSLEFFSPEACRSMKL----TYNESRVFEGIPTYRFTAPDTLFANGSVYPPN 317

  Fly   323 ACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFLAVEP 387
            ..||      .|.::|:.....||..||::.|.||||.||....:||.|:.|..::|..||.:.|
Mouse   318 EGFC------PCRESGIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHP 376

  Fly   388 ITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASKAKLAINLSSYGI 452
            :||:|:....::|:::.|:..........::.|::|:.||:|...:..:..|.....:.|....:
Mouse   377 VTGIPMNCSVKMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQSGAMGGKPLSTFYTQLVLMPQVL 441

  Fly   453 IFG-YSMIAFASVFLITGITLTVTKKWVRR 481
            .:. |.::....:.|:..|...:..:..||
Mouse   442 HYAQYVLLGLGGLLLLVPIICQLRSQVSRR 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_787957.1 CD36 17..473 CDD:460076 132/464 (28%)
Scarb1NP_001192012.1 CD36 26..447 CDD:460076 122/435 (28%)

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