DRSC/TRiP Functional Genomics Resources

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Protein Alignment crq and scarb2a

DIOPT Version :10

Sequence 1:NP_787957.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_775366.1 Gene:scarb2a / 192340 ZFINID:ZDB-GENE-020419-29 Length:531 Species:Danio rerio


Alignment Length:512 Identity:139/512 - (27%)
Similarity:250/512 - (48%) Gaps:46/512 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TQRKVWVFGLGSV---FLLLGILIV---VFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIYLS 67
            |:|...::..|.|   .|:|||.::   ||...|.:.:.:: :||...:...:.|:..|.|:|:.
Zfish     2 TRRSCTIYATGIVCAHLLILGIALLLAQVFQTMIQERIKKE-ITLAENSRVLDGWINPPPPVYMQ 65

  Fly    68 FYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYER-RTWFF-------D 124
            ::.||.|||::......|....:|||||:.|...:||.|:.:|.|..:... :::.|       |
Zfish    66 YFFFNVTNPDEFLAGKEKAKVTQMGPYTYREYRPRENVTYLENGTKIFATNPKSFVFLRNMSAGD 130

  Fly   125 PERSNGTLDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDN 189
            ||      .|.||..:.....|.:|:......|:..::..:...|..|::.:.|.| |..|::|.
Zfish   131 PE------VDRVTTVNIPMIAVMNELNSYSFFVRTAVSMYMGSMGMGLFMNRTVHE-ILWGFKDP 188

  Fly   190 ITDFLNLFNTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM 254
            :...|:... .::|   :.||.:.::|.  |::|.|..|||..:..|.|::..|||.|:..::..
Zfish   189 LLTKLHAMR-PEVD---EHFGLMYNKNG--THEGEFVFHTGEKNYMNYGKIDTWNGISQMNWWSS 247

  Fly   255 -PCGIVNGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHGLTATKWVGTEETLDSGEN 318
             ...::|||.|.:|...::..:.:.|||.|.||.::|......|..|:.|.::....:.|...:.
Zfish   248 NQSNMINGTDGSVFHTFLSRKELLYIFAADLCRSIHLGYVRDMEVKGIPAFRFAPPSDVLAPPDE 312

  Fly   319 YPNQACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPEKEKHEFFL 383
            .|..|.||..|  .:|...||::...||..|||..||||||.||:.|::|:.||.|.:|:||.:|
Zfish   313 NPANAGFCVPA--GDCLGKGVLKVSVCRQGAPIVVSFPHFYQADERYINAIEGMNPNEEEHETYL 375

  Fly   384 AVEPITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASKAKLAINLS 448
            .:.|.||||::...|.|:|::::....|...:.:.:.:.|:.:.::.|.:..|.|::.::.:.:.
Zfish   376 DINPTTGVPIRACKRAQLNIILKRVRGFPNTKFLNETIFPIMYVNETATIDDESAAQMRMLLLIV 440

  Fly   449 SYGIIFGYSMIAFASVFLITGITLTV----TKKWVRR-----------TPEDEDILT 490
            :....|...::|...:.|:..|.|..    .|..|:|           |.:||...|
Zfish   441 TVVSNFPVIILALGVILLVVLIFLVCRNRQRKNEVKRIDFTEAFHSFATTKDETAYT 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_787957.1 CD36 17..473 CDD:460076 129/470 (27%)
scarb2aNP_775366.1 CD36 30..465 CDD:460076 123/450 (27%)

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