DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crq and scav-5

DIOPT Version :9

Sequence 1:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_509651.2 Gene:scav-5 / 181200 WormBaseID:WBGene00011076 Length:536 Species:Caenorhabditis elegans


Alignment Length:535 Identity:127/535 - (23%)
Similarity:230/535 - (42%) Gaps:82/535 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FGLGSVFLLLGI-LIVVFWPGIADNLVEDGLTLKPGTDA---YESWLEA--PIPIYLSFYMFNWT 74
            |.:.:.|.|.|: :.:.||| |.::.:.....|....|.   |.::|.|  |:...:.|.:||.|
 Worm    12 FVIAAFFFLSGLSMWIAFWP-IFNSELRSNYKLGANDDGSLHYAAFLYANPPMKNVMKFNLFNVT 75

  Fly    75 NPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNG---TLDDMV 136
            ||::::....||..:|:|.|.|||..:|:.|.|..:.|..:|:....:...|..|.   ..:|.:
 Worm    76 NPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVDNDAGYNYNDKI 140

  Fly   137 ----TAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITD----- 192
                :.|....:||.....:.....|.:::..|...|...:::|.|.:.:.:||:|.:..     
 Worm   141 MFPNSIAEGAVSTVFGPQSEFSPTAKILVSIGLVMLGEYPFISKTVKDVLMDGYEDPLLSVAHSG 205

  Fly   193 -FLNLFN----TTKID-IP-YKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETG 250
             |::|.|    .:::: || .|.|.:|:..|.|  ||..:.|:||.:|.:.||.:..|     .|
 Worm   206 IFISLVNFYGYGSQLNYIPEMKTFAYLSGYNNS--YDENYWINTGYNDFNKLGFVESW-----AG 263

  Fly   251 FYEMPCG---------IVNGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHGLT---- 302
            ..::|..         |....:|.:....:...||:..|.:..||..    :.||...||.    
 Worm   264 LEQLPASFWPTLEARQIKGPDSGSLSKIHLTKTDELPFFLSFMCRSF----KRTYWQDGLVDGIK 324

  Fly   303 ----ATKWVGTEETLD--SGENYPNQ------ACFCDE---ARFDECPKT---------GV--VE 341
                |..:...:.||:  :|..|.||      ..:||:   ....:|.||         |:  :.
 Worm   325 TMAFAVPYEEFDTTLEKNAGFRYKNQENVDYFPDWCDKNTTTSLSQCQKTANGTFLLPPGIFPLV 389

  Fly   342 CKACRDKAPIYS---SFPHFYLADQSYVDAVSGMKPEKEKHE-FFLAVEPITGVPVQVHGRIQIN 402
            |....:..|.::   |.|||..:.......:|||.|:.|||: .....|..:|..:||..|.|:|
 Worm   390 CYPGHNAQPPFTVLVSPPHFLYSPPEVQHHLSGMNPDPEKHKPMVFHQEKTSGTALQVDVRFQVN 454

  Fly   403 MMIEPDDDFDIYRGVQKVLMPMFWFDQYAELSSELASKAKLAINLSSYGIIFGYSMIAFASVFLI 467
            :.:..:....:...:..|::|:|:.|.:|.:...:.....|.:.:....|.:...::.|.|:.::
 Worm   455 LPVVNNKGSIMSSQMPNVIIPLFYEDSHALVKDFVMDTVWLGVIIVPRIIEYLKFVLIFISICIL 519

  Fly   468 TGITLTVTKKWVRRT 482
            |  ||.|.:..|:.|
 Worm   520 T--TLLVIRVRVKGT 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crqNP_001245823.1 CD36 19..470 CDD:307331 121/518 (23%)
scav-5NP_509651.2 CD36 15..524 CDD:279474 123/522 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8415
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16888
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.960

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