DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ex and frm-5.1

DIOPT Version :9

Sequence 1:NP_001259823.1 Gene:ex / 33218 FlyBaseID:FBgn0004583 Length:1427 Species:Drosophila melanogaster
Sequence 2:NP_001255216.1 Gene:frm-5.1 / 176822 WormBaseID:WBGene00001492 Length:1565 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exNP_001259823.1 B41 27..297 CDD:214604
FERM_N 40..98 CDD:286467
FERM_M 132..305 CDD:278785
FERM_C_FRMD1_FRMD6 298..405 CDD:270006
PHA03255 512..>681 CDD:165513
frm-5.1NP_001255216.1 PKc_like 9..164 CDD:304357
B41 686..891 CDD:214604
FERM_N 689..751 CDD:286467
FERM_M 781..891 CDD:278785
PH-like 887..1016 CDD:302622
PDZ_signaling 1127..1208 CDD:238492
PDZ_signaling 1380..1458 CDD:238492
PDZ_signaling 1479..1559 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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