DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS8 and ttc8

DIOPT Version :9

Sequence 1:NP_608524.1 Gene:BBS8 / 33217 FlyBaseID:FBgn0031255 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001035399.1 Gene:ttc8 / 678551 ZFINID:ZDB-GENE-030131-8846 Length:507 Species:Danio rerio


Alignment Length:549 Identity:179/549 - (32%)
Similarity:256/549 - (46%) Gaps:109/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MLATLELD-YFRAVSLYRRRSYERCAELCNALL-QAGHDGHVQLFTTKEEEEEEQHQQQQAEHSR 67
            |..|:.:| .|.|.|..|||.::|||::|:.|| ::.:|                          
Zfish     1 MEVTVSMDPLFLAWSSCRRRRFQRCADICSTLLAESPYD-------------------------- 39

  Fly    68 FGSNLQRIGPRPRGAAGGGAGAVDSGPSIMMPTWLMEGVWQLKMRALTQRVYVDDLDEDDGGNEA 132
                                                :.||.||.||||:.||:|:::.:..| .|
Zfish    40 ------------------------------------QAVWSLKTRALTEMVYIDEVEVEQEG-IA 67

  Fly   133 TEEVEFERIATAARPGSSIKTAFQPRPLTSQ----------RAQQARSRGAGVAHSSDGRLNSSR 187
            ...::...||..||||:|::     ||.|||          ..|..|.....|..|:    .|.|
Zfish    68 DMMLDESSIAQVARPGTSLR-----RPATSQAGAPTPAVRPMTQSGRPITGFVRPST----LSGR 123

  Fly   188 PGS--AAVARPGT-SLSRPGSSLGS---RCGTASRIRATSAAAFNVGDATSKLYQASRLNPTIYA 246
            |.:  .|:..|.| |.:||.||...   |.||||.:........|:          ||||...||
Zfish   124 PETMEQAIRTPRTASTARPVSSASGRFVRLGTASMLTHPDGPFINL----------SRLNLAKYA 178

  Fly   247 ERETLVKALFQFLYYHEADVQKAHSLCQAVLEVERQKPSGSTGCTLSWWWQQQMGRCLLALHYPR 311
            :|..|.|.||:::::||.||:.|..|.....|..:.|         .|||:.|:|:|...|...|
Zfish   179 KRPNLCKTLFEYIFHHENDVKTALDLAALATEHAQFK---------DWWWKVQLGKCYYRLGLLR 234

  Fly   312 RAEPFLQQSLTSFPHPDTYLLLSRVYQRIKQPERALLVIGEVVDSRPFDVTYRLEQARIHQAMEQ 376
            .||...:.:|......||:|.|::||||:.||..||.|..:.:|..|.:||.....||||:.|..
Zfish   235 EAEKQFRSALAQQEFVDTHLYLAKVYQRLDQPITALTVFKQGLDHFPAEVTLLTGIARIHEEMNN 299

  Fly   377 QEDALQLYRLAAKLHPINVESLASIAVGYFYDNNPEMALMYYRRILSLGAQSPELYCNIALCCLY 441
            ...|.:.||...|....:||::|.|...:||.:.||:||.:|||:|.:|..:.:||.|:.|||.|
Zfish   300 MSSATEYYREVLKQDNTHVEAIACIGSTHFYTDQPEIALRFYRRLLQMGVFNCQLYNNLGLCCFY 364

  Fly   442 GGQIDLVLPCFQRALATATQPGQKSDIWYNLSFVAVTSGDFNLAKRCLQLCLTSDAQNGAALNNL 506
            ..|.|:.|.|.:||||..:...:::|:||||..|||..||..||.:|.:|.|..:..:|.|.|||
Zfish   365 AQQYDMSLSCLERALALVSGDEEQADVWYNLGHVAVGIGDLTLAYQCFKLSLAFNNNHGEAYNNL 429

  Fly   507 AVLAAQSGDILGAKSYLNAAKDVMPDAAE 535
            |||..:.|.|..||::|..|..:.|...|
Zfish   430 AVLELRKGHIEQAKAFLQTAASLSPHMYE 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS8NP_608524.1 TPR repeat 299..322 CDD:276809 7/22 (32%)
TPR repeat 327..355 CDD:276809 13/27 (48%)
TPR_16 331..392 CDD:290168 24/60 (40%)
TPR repeat 365..389 CDD:276809 8/23 (35%)
Coatomer_WDAD <378..519 CDD:281977 59/140 (42%)
TPR_11 394..457 CDD:290150 28/62 (45%)
TPR repeat 394..424 CDD:276809 14/29 (48%)
TPR repeat 429..457 CDD:276809 13/27 (48%)
TPR_11 465..526 CDD:290150 28/60 (47%)
TPR repeat 466..493 CDD:276809 14/26 (54%)
TPR repeat 500..526 CDD:276809 13/25 (52%)
ttc8NP_001035399.1 TPR 216..499 CDD:223533 98/243 (40%)
TPR repeat 222..245 CDD:276809 7/22 (32%)
TPR repeat 249..279 CDD:276809 13/29 (45%)
TPR repeat 286..312 CDD:276809 8/25 (32%)
TPR repeat 318..346 CDD:276809 13/27 (48%)
TPR repeat 352..380 CDD:276809 13/27 (48%)
TPR_1 353..381 CDD:278916 14/27 (52%)
TPR repeat 388..418 CDD:276809 15/29 (52%)
TPR repeat 423..449 CDD:276809 13/25 (52%)
TPR repeat 457..482 CDD:276809 1/2 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592274
Domainoid 1 1.000 98 1.000 Domainoid score I7091
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 98 1.000 Inparanoid score I5013
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D315044at33208
OrthoFinder 1 1.000 - - FOG0006606
OrthoInspector 1 1.000 - - oto40036
orthoMCL 1 0.900 - - OOG6_105321
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4841
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.800

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