DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS8 and Tmtc3

DIOPT Version :9

Sequence 1:NP_608524.1 Gene:BBS8 / 33217 FlyBaseID:FBgn0031255 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_477246.2 Gene:Tmtc3 / 37401 FlyBaseID:FBgn0020312 Length:926 Species:Drosophila melanogaster


Alignment Length:258 Identity:53/258 - (20%)
Similarity:98/258 - (37%) Gaps:56/258 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 DTYLLLSRVYQRIKQPERALLVIGEVVDSRPFDVTYRLEQARIHQAMEQQEDALQLYRLAAKLHP 392
            |..:.|:|..|..:..|:|||     .|:...|:.|.|....:.|...||  |...:..|.:|:|
  Fly   639 DILMKLNRTAQAQEVYEQALL-----YDNENADIYYNLGVVFLEQGKSQQ--AQVYFNKAIELYP 696

  Fly   393 INVESLASIAVGYFYDNNPEMALMYYR----RILSLGAQSPELYCNIALCCLYGGQIDLVLPCFQ 453
            .:.::|.:.|: ...:...|.|....|    ::|....|:.::|.|:.:..:.....|.....|:
  Fly   697 EHEQALLNSAI-LLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFK 760

  Fly   454 RALATATQPGQKSDI---WYNLSFV---------------------------AVTSGDFNL---- 484
            ||:..      |:|.   .:||:.:                           .:..||..:    
  Fly   761 RAIHL------KADFRSALFNLALLLADTKRPLDAVPFLNQLIRHHPSHVKGLILLGDIYINHMK 819

  Fly   485 ----AKRCLQLCLTSDAQNGAALNNLAVLAAQSGDILGAKSYLNAAKDVMPDAAEVTTNLQFM 543
                |::|.:..|..|..|...|:||.|:..:...:..|.:.|..|:.:.|....:..:||.:
  Fly   820 DLDEAEKCYRSILHYDPHNTQGLHNLCVVFVERKRLAKAAACLQYAQRLAPAEDYIGRHLQIV 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS8NP_608524.1 TPR repeat 299..322 CDD:276809
TPR repeat 327..355 CDD:276809 8/26 (31%)
TPR_16 331..392 CDD:290168 17/60 (28%)
TPR repeat 365..389 CDD:276809 6/23 (26%)
Coatomer_WDAD <378..519 CDD:281977 32/182 (18%)
TPR_11 394..457 CDD:290150 13/66 (20%)
TPR repeat 394..424 CDD:276809 6/33 (18%)
TPR repeat 429..457 CDD:276809 6/27 (22%)
TPR_11 465..526 CDD:290150 17/98 (17%)
TPR repeat 466..493 CDD:276809 7/64 (11%)
TPR repeat 500..526 CDD:276809 6/25 (24%)
Tmtc3NP_477246.2 DUF1736 323..396 CDD:369859
PEP_TPR_lipo <513..871 CDD:274350 50/245 (20%)
TPR repeat 514..542 CDD:276809
TPR repeat 547..591 CDD:276809
TPR repeat 598..625 CDD:276809
TPR repeat 630..660 CDD:276809 8/25 (32%)
TPR repeat 665..693 CDD:276809 8/29 (28%)
TPR repeat 737..764 CDD:276809 6/26 (23%)
TPR repeat 803..834 CDD:276809 5/30 (17%)
TPR repeat 839..867 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467054
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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